HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:14.9 nTPM
HPA Brain:59.9 nTPM
GTEx:14.9 nTPM
FANTOM5:47.7 Scaled Tags Per Million
Pig:41.1 nTPM
Mouse:46.4 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038790
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 59.9
Sample id Sample description nTPM
Hippocampus
nTPM: 55.7
2621 Female, age 67, right hemisphere 62.1
2148 Female, age 91, left hemisphere 59.1
1855 Male, age 76, left hemisphere 55.6
1898 Male, age 80, left hemisphere 54.4
1911 Female, age 85, right hemisphere 52.1
2529 Female, age 94, left hemisphere 51.1
Dentate gyrus
nTPM: 57.4
2531 Female, age 67, both hemispheres 71.4
2530 Female, age 94, left hemisphere 60.7
1927 Female, age 91, both hemispheres 58.2
2246 Female, age 85, both hemispheres 55.4
2528 Male, age 74, both hemispheres 50.0
2010 Male, age 76, both hemispheres 48.6
Entorhinal gyrus
nTPM: 57.0
2613 Female, age 94, left hemisphere 68.3
2764 Male, age 80, right hemisphere 62.1
2686 Male, age 75, right hemisphere 56.5
1787 Male, age 76, left hemisphere 56.4
1938 Female, age 85, left hemisphere 53.5
2117 Female, age 91, right hemisphere 45.2
Hippocampus, CA1
nTPM: 55.4
2749 Male, age 80, left hemisphere 68.8
1873 Female, age 85, both hemispheres 57.0
2527 Male, age 74, both hemispheres 52.5
2045 Male, age 76, both hemispheres 51.9
2082 Female, age 91, right hemisphere 46.8
Hippocampus, CA2
nTPM: 51.6
1963 Male, age 80, left hemisphere 60.1
1940 Female, age 85, left hemisphere 56.1
2437 Female, age 94, left hemisphere 51.9
2113 Female, age 91, right hemisphere 48.3
1892 Male, age 76, both hemispheres 47.5
2249 Male, age 74, both hemispheres 45.4
Hippocampus, CA3
nTPM: 59.9
2861 Female, age 67, both hemispheres 78.8
2620 Female, age 94, left hemisphere 74.9
2137 Male, age 80, left hemisphere 62.3
1891 Female, age 85, both hemispheres 49.8
2436 Male, age 74, both hemispheres 47.6
1867 Male, age 76, both hemispheres 46.1
Parahippocampal cortex
nTPM: 56.1
2622 Female, age 67, right hemisphere 66.8
2532 Female, age 72, left hemisphere 62.7
1933 Female, age 85, both hemispheres 57.2
2245 Female, age 91, both hemispheres 57.1
2693 Female, age 94, both hemispheres 57.1
2692 Male, age 74, both hemispheres 56.8
1850 Male, age 80, both hemispheres 53.1
2018 Male, age 76, both hemispheres 51.0
2250 Female, age 67, right hemisphere 49.8
1990 Female, age 91, right hemisphere 49.6
Perirhinal gyrus
nTPM: 54.0
1794 Male, age 80, right hemisphere 59.2
1841 Female, age 85, right hemisphere 57.4
2848 Male, age 76, right hemisphere 52.6
1847 Female, age 91, left hemisphere 52.1
2521 Female, age 94, right hemisphere 48.8
Subiculum
nTPM: 52.3
1977 Female, age 85, both hemispheres 54.8
2619 Male, age 74, both hemispheres 53.6
2438 Female, age 94, left hemisphere 52.4
1901 Male, age 80, both hemispheres 51.9
2729 Female, age 91, right hemisphere 51.3
2042 Male, age 76, both hemispheres 49.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 24.5
Min nTPM: 6.1
Std nTPM: 3.2
Median nTPM: 14.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 24.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 24.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 22.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 22.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 20.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 20.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 20.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 20.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 20.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 20.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 19.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 47.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.7
FF:10153-102I9 76 years, female 62.3
FF:10169-103B7 60 years, female 33.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 41.1
Pig sample Sample description nTPM
Subiculum
nTPM: 35.4
Samples: 4

Max nTPM: 42.5
Min nTPM: 31.5
Sample A Female 42.5
Sample B Female 31.5
Sample C Male 35.3
Sample D Male 32.4
Dorsal hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 38.9
Min nTPM: 31.9
Sample A Female 38.9
Sample B Female 37.1
Sample C Male 33.2
Sample D Male 31.9
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 43.3
Min nTPM: 38.8
Sample A Female 43.3
Sample B Female 38.8
Sample C Male 42.9
Sample D Male 39.6
Ventral hippocampus
nTPM: 35.4
Samples: 4

Max nTPM: 42.5
Min nTPM: 28.2
Sample A Female 30.3
Sample B Female 28.2
Sample C Male 42.5
Sample D Male 40.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 46.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.4
Samples: 4

Max nTPM: 54.4
Min nTPM: 41.0
Sample A Male 46.2
Sample B Male 44.0
Sample C Female 41.0
Sample D Female 54.4
Hippocampal formation
nTPM: 38.5
Samples: 4

Max nTPM: 39.9
Min nTPM: 36.9
Sample A Male 36.9
Sample B Male 38.7
Sample C Female 38.6
Sample D Female 39.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69028318 Antisense, RP_050316_01_A12, Mouse strain C57BL/6J (56 days, male) 6.6
74076084 Antisense, RP_051219_02_G01, Mouse strain C57BL/6J (56 days, male) 0.4

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