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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
68.8
nTPM
HPA Brain:
140.6
nTPM
GTEx:
68.8
nTPM
FANTOM5:
0.7
Scaled Tags Per Million
Pig:
49.4
nTPM
Mouse:
70.9
nTPM
Allen mouse:
10.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
140.6
Sample id
Sample description
nTPM
Amygdala nTPM: 122.6
2514
Male, age 75, right hemisphere
144.5
2517
Female, age 94, left hemisphere
139.4
1987
Female, age 91, left hemisphere
110.9
2695
Female, age 67, right hemisphere
109.2
2814
Male, age 76, right hemisphere
109.1
Basal amygdala nTPM: 138.6
2827
Female, age 67, right hemisphere
174.5
2609
Male, age 75, right hemisphere
163.4
2243
Female, age 91, right hemisphere
140.6
2685
Female, age 94, left hemisphere
138.2
1955
Male, age 76, both hemispheres
112.9
2110
Male, age 80, left hemisphere
101.7
Central amygdala nTPM: 124.0
2826
Female, age 94, left hemisphere
135.9
2515
Male, age 75, right hemisphere
132.9
2239
Male, age 80, left hemisphere
121.6
2701
Female, age 91, right hemisphere
116.0
1905
Male, age 76, both hemispheres
113.7
Corticomedial amygdala nTPM: 133.2
2535
Female, age 67, right hemisphere
154.3
2428
Male, age 75, right hemisphere
152.5
2429
Female, age 94, left hemisphere
137.8
2242
Female, age 91, right hemisphere
126.0
2240
Male, age 76, both hemispheres
116.4
2829
Male, age 80, left hemisphere
112.3
Lateral amygdala nTPM: 140.6
2830
Female, age 67, right hemisphere
175.1
2516
Male, age 75, right hemisphere
173.6
2534
Female, age 94, left hemisphere
133.6
2255
Female, age 91, right hemisphere
131.6
2256
Male, age 80, left hemisphere
122.4
1883
Male, age 76, both hemispheres
106.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
68.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 68.8
Samples: 152
Max nTPM: 130.3
Min nTPM: 21.2
Std nTPM: 20.7
Median nTPM: 64.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
130.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
124.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
120.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
119.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
112.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
107.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
105.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
104.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
104.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
103.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
103.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
101.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
99.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
97.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
97.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
97.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
96.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
95.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
95.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
95.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
95.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
95.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
91.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
91.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
91.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
90.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
89.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
89.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
87.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
87.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
86.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
85.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
85.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
84.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
83.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
83.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
83.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
82.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
82.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
82.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
81.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
81.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
81.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
80.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
80.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
80.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
79.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
79.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
79.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
77.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
77.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
77.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
77.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
76.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
74.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
74.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
73.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
73.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
73.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
73.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
71.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
71.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
71.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
70.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
70.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
70.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
68.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
67.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
66.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
66.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
65.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
65.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
65.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
65.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
65.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
65.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
64.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
64.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
63.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
63.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
62.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
62.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
62.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
62.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
62.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
61.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
61.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
61.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
61.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
61.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
60.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
60.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
60.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
60.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
60.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
59.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
58.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
58.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
57.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
57.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
57.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
57.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
57.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
56.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
56.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
55.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
55.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
55.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
55.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
54.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
53.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
53.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
53.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
53.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
53.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
52.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
52.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
51.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
51.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
51.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
51.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
50.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
49.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
49.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
49.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
49.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
48.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
48.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
47.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
47.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
47.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
47.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
46.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
46.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
46.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
45.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
45.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
45.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
44.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
43.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
43.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
43.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
42.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
42.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
42.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
39.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
39.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
37.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
35.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
35.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
28.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
21.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
70.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 70.9
Samples: 4
Max nTPM: 73.4
Min nTPM: 68.2
Sample A
Male
73.4
Sample B
Male
68.2
Sample C
Female
72.7
Sample D
Female
69.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.