HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:180.6 nTPM
HPA Brain:274.5 nTPM
GTEx:180.6 nTPM
FANTOM5:214.9 Scaled Tags Per Million
Pig:118.2 nTPM
Mouse:61.9 nTPM
Allen mouse:7.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008476
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 274.5
Sample id Sample description nTPM
Hippocampus
nTPM: 214.7
2529 Female, age 94, left hemisphere 295.9
2621 Female, age 67, right hemisphere 221.5
1911 Female, age 85, right hemisphere 209.3
1855 Male, age 76, left hemisphere 194.6
2148 Female, age 91, left hemisphere 188.4
1898 Male, age 80, left hemisphere 178.4
Dentate gyrus
nTPM: 211.8
2530 Female, age 94, left hemisphere 359.3
2010 Male, age 76, both hemispheres 249.6
2531 Female, age 67, both hemispheres 207.5
2246 Female, age 85, both hemispheres 174.6
2528 Male, age 74, both hemispheres 151.6
1927 Female, age 91, both hemispheres 128.0
Entorhinal gyrus
nTPM: 249.0
2686 Male, age 75, right hemisphere 357.9
2117 Female, age 91, right hemisphere 344.3
2764 Male, age 80, right hemisphere 232.8
2613 Female, age 94, left hemisphere 211.1
1938 Female, age 85, left hemisphere 182.1
1787 Male, age 76, left hemisphere 165.8
Hippocampus, CA1
nTPM: 163.1
2527 Male, age 74, both hemispheres 186.5
2082 Female, age 91, right hemisphere 178.3
1873 Female, age 85, both hemispheres 175.5
2749 Male, age 80, left hemisphere 151.1
2045 Male, age 76, both hemispheres 124.0
Hippocampus, CA2
nTPM: 202.3
1963 Male, age 80, left hemisphere 290.1
2437 Female, age 94, left hemisphere 237.2
2113 Female, age 91, right hemisphere 197.5
1940 Female, age 85, left hemisphere 189.6
2249 Male, age 74, both hemispheres 156.9
1892 Male, age 76, both hemispheres 142.5
Hippocampus, CA3
nTPM: 157.0
1891 Female, age 85, both hemispheres 244.3
1867 Male, age 76, both hemispheres 178.9
2861 Female, age 67, both hemispheres 172.5
2137 Male, age 80, left hemisphere 122.9
2620 Female, age 94, left hemisphere 117.9
2436 Male, age 74, both hemispheres 105.7
Parahippocampal cortex
nTPM: 189.6
2532 Female, age 72, left hemisphere 276.7
2692 Male, age 74, both hemispheres 264.8
2622 Female, age 67, right hemisphere 204.3
2018 Male, age 76, both hemispheres 199.0
2245 Female, age 91, both hemispheres 194.7
1990 Female, age 91, right hemisphere 182.2
1850 Male, age 80, both hemispheres 170.9
1933 Female, age 85, both hemispheres 159.2
2693 Female, age 94, both hemispheres 129.3
2250 Female, age 67, right hemisphere 115.2
Perirhinal gyrus
nTPM: 126.1
2848 Male, age 76, right hemisphere 139.1
1794 Male, age 80, right hemisphere 132.3
1847 Female, age 91, left hemisphere 123.6
2521 Female, age 94, right hemisphere 122.1
1841 Female, age 85, right hemisphere 113.5
Subiculum
nTPM: 274.5
2438 Female, age 94, left hemisphere 367.9
2042 Male, age 76, both hemispheres 341.1
1901 Male, age 80, both hemispheres 301.3
1977 Female, age 85, both hemispheres 229.3
2619 Male, age 74, both hemispheres 212.1
2729 Female, age 91, right hemisphere 195.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 180.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 180.6
Samples: 255

Max nTPM: 725.0
Min nTPM: 43.5
Std nTPM: 113.0
Median nTPM: 147.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 725.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 708.4
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 625.6
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 598.0
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 555.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 512.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 473.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 461.0
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 444.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 443.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 442.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 214.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 214.9
FF:10153-102I9 76 years, female 282.3
FF:10169-103B7 60 years, female 147.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 118.2
Pig sample Sample description nTPM
Subiculum
nTPM: 82.4
Samples: 4

Max nTPM: 92.9
Min nTPM: 72.0
Sample A Female 92.9
Sample B Female 91.0
Sample C Male 72.0
Sample D Male 73.5
Dorsal hippocampus
nTPM: 118.2
Samples: 4

Max nTPM: 154.4
Min nTPM: 71.9
Sample A Female 154.4
Sample B Female 106.5
Sample C Male 140.0
Sample D Male 71.9
Entorhinal cortex
nTPM: 73.7
Samples: 4

Max nTPM: 85.1
Min nTPM: 68.8
Sample A Female 70.2
Sample B Female 85.1
Sample C Male 68.8
Sample D Male 70.6
Ventral hippocampus
nTPM: 96.4
Samples: 4

Max nTPM: 108.6
Min nTPM: 78.0
Sample A Female 94.4
Sample B Female 78.0
Sample C Male 104.7
Sample D Male 108.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 61.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.0
Samples: 4

Max nTPM: 55.6
Min nTPM: 42.2
Sample A Male 55.6
Sample B Male 49.4
Sample C Female 48.7
Sample D Female 42.2
Hippocampal formation
nTPM: 61.9
Samples: 4

Max nTPM: 73.1
Min nTPM: 54.6
Sample A Male 54.6
Sample B Male 59.2
Sample C Female 73.1
Sample D Female 60.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
69752041 Antisense, RP_050505_01_A02, Mouse strain C57BL/6J (56 days, male) 7.5

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