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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
306.6
nTPM
HPA Brain:
795.7
nTPM
GTEx:
306.6
nTPM
FANTOM5:
577.9
Scaled Tags Per Million
Pig:
716.5
nTPM
Mouse:
1280.6
nTPM
Allen mouse:
24.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
795.7
Sample id
Sample description
nTPM
Amygdala nTPM: 364.9
2517
Female, age 94, left hemisphere
677.2
1987
Female, age 91, left hemisphere
455.9
2514
Male, age 75, right hemisphere
334.0
2814
Male, age 76, right hemisphere
285.0
2695
Female, age 67, right hemisphere
72.6
Basal amygdala nTPM: 795.7
2685
Female, age 94, left hemisphere
1046.2
2243
Female, age 91, right hemisphere
953.9
2827
Female, age 67, right hemisphere
917.8
2110
Male, age 80, left hemisphere
736.7
2609
Male, age 75, right hemisphere
675.7
1955
Male, age 76, both hemispheres
444.1
Central amygdala nTPM: 477.1
2826
Female, age 94, left hemisphere
965.9
2239
Male, age 80, left hemisphere
613.2
2515
Male, age 75, right hemisphere
318.1
2701
Female, age 91, right hemisphere
255.5
1905
Male, age 76, both hemispheres
232.9
Corticomedial amygdala nTPM: 722.7
2535
Female, age 67, right hemisphere
886.8
2829
Male, age 80, left hemisphere
865.4
2429
Female, age 94, left hemisphere
786.5
2242
Female, age 91, right hemisphere
755.3
2428
Male, age 75, right hemisphere
640.3
2240
Male, age 76, both hemispheres
401.8
Lateral amygdala nTPM: 559.0
2534
Female, age 94, left hemisphere
1144.3
2256
Male, age 80, left hemisphere
703.9
2255
Female, age 91, right hemisphere
525.0
2830
Female, age 67, right hemisphere
434.8
2516
Male, age 75, right hemisphere
277.9
1883
Male, age 76, both hemispheres
268.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
306.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 306.6
Samples: 152
Max nTPM: 895.3
Min nTPM: 1.6
Std nTPM: 183.2
Median nTPM: 281.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
895.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
805.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
742.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
729.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
679.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
667.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
664.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
645.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
632.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
629.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
621.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
614.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
595.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
592.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
586.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
582.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
566.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
550.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
542.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
532.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
530.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
511.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
506.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
504.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
498.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
497.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
489.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
474.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
471.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
459.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
457.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
456.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
451.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
446.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
440.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
438.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
436.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
425.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
423.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
422.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
411.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
406.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
401.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
400.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
400.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
395.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
388.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
379.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
377.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
374.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
361.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
359.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
359.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
356.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
352.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
351.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
350.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
350.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
344.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
343.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
343.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
342.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
331.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
329.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
322.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
316.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
305.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
301.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
297.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
296.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
290.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
286.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
285.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
284.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
284.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
282.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
280.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
280.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
271.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
270.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
267.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
264.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
261.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
251.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
247.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
234.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
232.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
229.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
228.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
224.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
224.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
224.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
223.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
219.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
218.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
211.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
211.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
209.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
208.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
200.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
198.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
192.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
189.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
182.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
181.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
180.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
175.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
171.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
170.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
170.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
165.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
164.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
163.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
157.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
155.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
147.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
147.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
146.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
145.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
141.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
137.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
136.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
135.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
134.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
131.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
129.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
129.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
124.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
124.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
123.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
120.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
117.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
116.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
116.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
113.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
111.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
105.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
100.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
97.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
93.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
92.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
84.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
68.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
67.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
65.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
64.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
58.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
31.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
23.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
22.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
4.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1280.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 1280.6
Samples: 4
Max nTPM: 1500.3
Min nTPM: 1098.4
Sample A
Male
1098.4
Sample B
Male
1310.6
Sample C
Female
1500.3
Sample D
Female
1213.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.