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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
86.8
nTPM
HPA Brain:
152.9
nTPM
GTEx:
86.8
nTPM
FANTOM5:
181.7
Scaled Tags Per Million
Pig:
201.8
nTPM
Mouse:
44.9
nTPM
Allen mouse:
17.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
152.9
Sample id
Sample description
nTPM
Amygdala nTPM: 152.9
2695
Female, age 67, right hemisphere
171.6
2514
Male, age 75, right hemisphere
170.7
2814
Male, age 76, right hemisphere
147.0
1987
Female, age 91, left hemisphere
142.9
2517
Female, age 94, left hemisphere
132.4
Basal amygdala nTPM: 128.6
2609
Male, age 75, right hemisphere
158.7
2110
Male, age 80, left hemisphere
131.8
1955
Male, age 76, both hemispheres
129.9
2827
Female, age 67, right hemisphere
122.2
2685
Female, age 94, left hemisphere
115.5
2243
Female, age 91, right hemisphere
113.7
Central amygdala nTPM: 142.2
2826
Female, age 94, left hemisphere
169.7
2515
Male, age 75, right hemisphere
168.5
2239
Male, age 80, left hemisphere
129.8
1905
Male, age 76, both hemispheres
129.4
2701
Female, age 91, right hemisphere
113.6
Corticomedial amygdala nTPM: 130.0
2428
Male, age 75, right hemisphere
160.6
2829
Male, age 80, left hemisphere
143.4
2240
Male, age 76, both hemispheres
138.2
2429
Female, age 94, left hemisphere
122.7
2242
Female, age 91, right hemisphere
117.4
2535
Female, age 67, right hemisphere
98.0
Lateral amygdala nTPM: 136.3
2516
Male, age 75, right hemisphere
179.7
2830
Female, age 67, right hemisphere
147.1
1883
Male, age 76, both hemispheres
137.2
2534
Female, age 94, left hemisphere
131.5
2256
Male, age 80, left hemisphere
120.6
2255
Female, age 91, right hemisphere
101.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
86.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 86.8
Samples: 152
Max nTPM: 139.5
Min nTPM: 31.4
Std nTPM: 16.7
Median nTPM: 85.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
139.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
132.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
128.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
121.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
121.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
120.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
118.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
118.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
118.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
116.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
114.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
113.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
111.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
109.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
108.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
107.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
106.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
106.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
105.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
105.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
103.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
103.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
103.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
102.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
101.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
101.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
100.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
100.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
99.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
99.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
99.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
99.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
98.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
98.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
98.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
97.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
97.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
96.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
96.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
96.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
96.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
95.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
95.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
95.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
95.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
95.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
94.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
94.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
94.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
94.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
93.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
93.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
92.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
91.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
91.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
91.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
90.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
90.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
90.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
90.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
90.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
89.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
89.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
89.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
89.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
89.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
88.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
88.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
87.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
87.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
87.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
86.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
86.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
86.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
85.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
85.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
85.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
85.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
84.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
84.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
84.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
84.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
84.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
83.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
83.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
83.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
83.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
82.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
82.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
82.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
82.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
81.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
81.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
81.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
80.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
80.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
80.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
79.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
79.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
79.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
78.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
78.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
78.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
78.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
78.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
77.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
77.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
76.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
76.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
76.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
76.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
76.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
75.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
75.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
75.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
75.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
74.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
74.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
74.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
74.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
74.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
73.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
73.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
73.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
73.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
72.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
72.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
72.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
71.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
70.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
70.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
70.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
69.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
69.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
67.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
66.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
66.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
65.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
64.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
63.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
63.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
63.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
63.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
63.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
63.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
62.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
62.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
59.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
56.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
56.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
52.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
31.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
44.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 44.9
Samples: 4
Max nTPM: 46.2
Min nTPM: 44.1
Sample A
Male
46.2
Sample B
Male
45.2
Sample C
Female
44.1
Sample D
Female
44.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.