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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
151.6
nTPM
HPA Brain:
76.5
nTPM
GTEx:
151.6
nTPM
FANTOM5:
195.8
Scaled Tags Per Million
Pig:
124.3
nTPM
Mouse:
137.9
nTPM
Allen mouse:
9.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
76.5
Sample id
Sample description
nTPM
Amygdala nTPM: 76.5
2814
Male, age 76, right hemisphere
97.6
2695
Female, age 67, right hemisphere
84.7
2514
Male, age 75, right hemisphere
80.3
2517
Female, age 94, left hemisphere
62.4
1987
Female, age 91, left hemisphere
57.3
Basal amygdala nTPM: 60.6
2827
Female, age 67, right hemisphere
68.5
2609
Male, age 75, right hemisphere
67.6
1955
Male, age 76, both hemispheres
60.8
2685
Female, age 94, left hemisphere
60.8
2110
Male, age 80, left hemisphere
59.6
2243
Female, age 91, right hemisphere
46.3
Central amygdala nTPM: 67.0
2826
Female, age 94, left hemisphere
82.2
1905
Male, age 76, both hemispheres
73.3
2515
Male, age 75, right hemisphere
63.9
2701
Female, age 91, right hemisphere
58.4
2239
Male, age 80, left hemisphere
57.2
Corticomedial amygdala nTPM: 51.1
2428
Male, age 75, right hemisphere
65.8
2829
Male, age 80, left hemisphere
51.3
2535
Female, age 67, right hemisphere
49.8
2429
Female, age 94, left hemisphere
49.2
2240
Male, age 76, both hemispheres
45.3
2242
Female, age 91, right hemisphere
45.1
Lateral amygdala nTPM: 74.3
2830
Female, age 67, right hemisphere
90.6
1883
Male, age 76, both hemispheres
86.7
2516
Male, age 75, right hemisphere
79.1
2256
Male, age 80, left hemisphere
67.5
2534
Female, age 94, left hemisphere
67.4
2255
Female, age 91, right hemisphere
54.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
151.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 151.6
Samples: 152
Max nTPM: 356.1
Min nTPM: 26.1
Std nTPM: 51.3
Median nTPM: 138.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
356.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
331.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
294.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
274.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
272.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
262.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
255.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
245.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
238.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
235.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
234.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
230.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
224.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
221.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
218.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
216.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
216.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
214.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
212.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
211.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
209.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
208.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
206.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
206.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
202.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
200.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
197.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
196.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
190.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
188.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
188.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
187.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
187.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
183.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
182.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
180.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
179.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
178.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
178.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
177.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
175.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
174.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
173.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
173.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
170.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
170.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
170.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
169.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
168.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
167.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
165.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
165.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
165.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
164.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
163.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
161.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
161.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
157.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
157.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
155.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
154.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
154.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
153.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
152.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
151.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
148.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
147.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
144.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
144.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
143.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
143.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
142.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
141.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
140.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
139.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
139.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
137.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
137.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
136.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
136.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
135.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
135.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
134.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
134.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
134.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
134.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
133.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
133.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
133.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
132.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
131.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
131.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
129.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
128.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
127.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
127.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
126.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
125.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
124.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
124.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
124.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
123.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
122.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
121.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
121.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
120.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
118.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
117.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
117.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
117.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
117.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
116.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
115.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
114.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
113.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
112.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
112.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
112.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
111.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
111.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
111.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
110.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
110.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
109.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
108.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
107.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
106.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
106.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
105.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
105.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
104.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
104.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
103.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
102.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
98.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
98.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
98.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
97.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
93.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
93.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
93.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
93.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
90.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
87.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
87.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
86.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
86.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
86.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
85.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
82.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
75.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
26.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
137.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 138.0
Samples: 4
Max nTPM: 173.8
Min nTPM: 123.1
Sample A
Male
125.2
Sample B
Male
123.1
Sample C
Female
173.8
Sample D
Female
129.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.