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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
383.3
nTPM
HPA Brain:
223.0
nTPM
GTEx:
383.3
nTPM
FANTOM5:
318.9
Scaled Tags Per Million
Pig:
212.9
nTPM
Mouse:
104.3
nTPM
Allen mouse:
16.1
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
223.0
Sample id
Sample description
nTPM
Amygdala nTPM: 108.2
2517
Female, age 94, left hemisphere
157.4
2514
Male, age 75, right hemisphere
107.4
2814
Male, age 76, right hemisphere
96.5
2695
Female, age 67, right hemisphere
96.4
1987
Female, age 91, left hemisphere
83.2
Basal amygdala nTPM: 223.0
2827
Female, age 67, right hemisphere
310.7
2243
Female, age 91, right hemisphere
238.8
2110
Male, age 80, left hemisphere
229.4
2685
Female, age 94, left hemisphere
223.1
2609
Male, age 75, right hemisphere
202.0
1955
Male, age 76, both hemispheres
134.0
Central amygdala nTPM: 150.1
2826
Female, age 94, left hemisphere
316.2
2239
Male, age 80, left hemisphere
173.5
2515
Male, age 75, right hemisphere
100.8
1905
Male, age 76, both hemispheres
82.8
2701
Female, age 91, right hemisphere
77.4
Corticomedial amygdala nTPM: 212.0
2535
Female, age 67, right hemisphere
322.3
2829
Male, age 80, left hemisphere
261.9
2428
Male, age 75, right hemisphere
189.2
2242
Female, age 91, right hemisphere
185.2
2429
Female, age 94, left hemisphere
158.3
2240
Male, age 76, both hemispheres
155.4
Lateral amygdala nTPM: 187.6
2534
Female, age 94, left hemisphere
290.1
2830
Female, age 67, right hemisphere
236.6
2256
Male, age 80, left hemisphere
211.5
2516
Male, age 75, right hemisphere
150.7
2255
Female, age 91, right hemisphere
119.0
1883
Male, age 76, both hemispheres
118.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
383.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 383.3
Samples: 152
Max nTPM: 1510.6
Min nTPM: 26.5
Std nTPM: 174.0
Median nTPM: 366.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1510.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
846.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
779.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
770.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
742.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
729.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
727.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
685.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
677.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
664.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
647.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
634.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
628.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
587.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
567.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
567.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
558.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
547.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
546.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
542.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
538.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
531.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
522.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
520.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
518.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
508.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
504.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
502.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
500.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
495.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
483.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
482.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
473.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
472.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
470.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
465.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
463.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
461.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
457.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
457.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
456.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
454.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
449.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
448.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
441.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
439.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
437.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
436.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
434.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
428.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
426.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
426.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
425.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
423.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
409.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
409.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
402.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
402.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
398.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
397.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
393.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
391.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
388.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
384.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
383.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
382.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
382.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
380.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
379.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
379.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
379.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
375.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
373.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
372.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
369.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
367.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
365.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
365.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
362.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
358.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
353.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
353.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
346.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
345.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
340.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
340.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
337.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
334.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
334.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
333.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
333.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
331.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
328.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
315.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
313.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
312.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
312.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
309.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
307.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
305.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
300.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
298.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
296.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
296.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
294.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
293.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
288.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
286.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
285.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
281.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
278.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
277.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
272.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
264.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
256.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
253.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
250.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
249.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
248.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
243.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
242.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
240.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
237.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
235.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
234.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
234.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
229.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
229.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
227.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
226.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
225.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
218.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
218.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
218.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
213.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
209.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
209.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
200.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
194.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
190.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
190.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
186.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
184.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
180.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
175.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
175.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
168.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
165.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
157.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
147.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
91.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
26.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
104.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 104.4
Samples: 4
Max nTPM: 128.4
Min nTPM: 94.8
Sample A
Male
94.8
Sample B
Male
96.5
Sample C
Female
128.4
Sample D
Female
97.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.