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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
8.6
nTPM
HPA Brain:
72.1
nTPM
GTEx:
8.6
nTPM
FANTOM5:
97.5
Scaled Tags Per Million
Pig:
28.3
nTPM
Mouse:
10.1
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
72.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 70.2
2219
Male, age 76, both hemispheres
79.2
1830
Male, age 51, unknown
76.2
2586
Male, age 75, left hemisphere
75.9
2666
Male, age 74, left hemisphere
74.8
1833
Male, age 53, unknown
74.0
2828
Female, age 72, unknown
69.6
2019
Male, age 18, unknown
67.5
1827
Male, age 72, unknown
64.2
2411
Female, age 72, unknown
60.4
1870
Female, age 42, unknown
59.9
Dorsal raphe nucleus nTPM: 64.7
2047
Male, age 72, unknown
72.0
2016
Female, age 72, unknown
68.4
2750
Male, age 76, both hemispheres
66.4
1828
Male, age 53, unknown
64.6
2298
Female, age 72, unknown
51.9
Inferior colliculus nTPM: 70.4
2849
Male, age 72, unknown
75.3
1890
Male, age 53, unknown
72.9
1848
Female, age 42, unknown
71.2
2097
Female, age 72, unknown
62.1
Median raphe nucleus nTPM: 65.2
2220
Male, age 76, midline
65.2
Periaquaductal grey, anterior nTPM: 67.6
1947
Male, age 18, unknown
73.2
2502
Female, age 75, unknown
69.4
1795
Male, age 51, unknown
60.1
Periaquaductal grey, dorsal nTPM: 69.8
2850
Male, age 76, both hemispheres
73.4
1831
Male, age 72, unknown
71.0
1840
Male, age 53, unknown
67.6
2464
Female, age 72, unknown
67.3
Periaquaductal grey, lateral nTPM: 65.6
2140
Male, age 76, both hemispheres
73.4
2272
Male, age 74, both hemispheres
62.0
2053
Male, age 18, unknown
61.3
Pretectal area nTPM: 65.7
2316
Male, age 76, right hemisphere
72.4
2407
Male, age 75, both hemispheres
72.4
2667
Female, age 75, unknown
71.6
2825
Male, age 18, unknown
67.3
1816
Male, age 51, unknown
65.1
1817
Female, age 42, unknown
64.2
2007
Male, age 72, unknown
63.4
2273
Male, age 74, both hemispheres
62.5
2224
Female, age 72, unknown
62.2
1815
Male, age 53, unknown
61.8
1944
Female, age 72, unknown
60.1
Red nucleus nTPM: 72.1
1904
Male, age 53, unknown
80.4
2584
Male, age 75, left hemisphere
79.3
2823
Male, age 76, right hemisphere
75.7
2769
Male, age 72, unknown
73.9
1865
Male, age 51, unknown
73.5
2785
Male, age 18, unknown
73.5
2227
Male, age 72, unknown
72.3
1954
Female, age 42, unknown
71.4
2588
Male, age 74, left hemisphere
70.8
2503
Female, age 72, unknown
70.2
1821
Female, age 72, unknown
62.9
2725
Female, age 75, unknown
62.0
Substantia nigra nTPM: 64.1
2665
Male, age 74, both hemispheres
74.2
2583
Male, age 75, right hemisphere
70.5
2699
Male, age 18, unknown
67.7
2590
Female, age 75, unknown
65.3
2409
Female, age 72, unknown
64.7
1889
Female, age 72, unknown
62.3
1916
Female, age 42, unknown
60.3
1851
Male, age 51, unknown
59.5
1941
Male, age 53, unknown
58.4
2241
Male, age 72, unknown
58.0
Superior colliculus nTPM: 68.1
2664
Male, age 75, both hemispheres
77.3
1913
Female, age 42, unknown
72.0
1895
Male, age 76, right hemisphere
68.8
2668
Female, age 75, unknown
68.6
1839
Male, age 51, unknown
68.4
1995
Male, age 72, unknown
66.9
2587
Male, age 74, left hemisphere
66.3
1796
Male, age 53, unknown
65.9
2087
Female, age 72, unknown
64.6
2261
Male, age 18, unknown
62.1
Ventral tegmental area nTPM: 64.0
1942
Male, age 51, unknown
69.1
2223
Female, age 72, unknown
68.5
2218
Male, age 76, both hemispheres
65.9
2021
Male, age 53, unknown
63.9
1915
Female, age 42, unknown
58.7
2410
Female, age 72, unknown
58.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
8.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 8.6
Samples: 139
Max nTPM: 15.8
Min nTPM: 4.7
Std nTPM: 1.7
Median nTPM: 8.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
15.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
15.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
13.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
12.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
12.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
11.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
11.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
11.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
11.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
11.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
11.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
10.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
10.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
10.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
10.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
10.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
10.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
10.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
10.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
10.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
10.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
10.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
10.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
10.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
10.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
10.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
10.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
10.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
10.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
10.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
10.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
9.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
9.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
9.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
9.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
9.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
9.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
9.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
9.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
9.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
9.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
9.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
9.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
9.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
9.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
9.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
9.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
9.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
9.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
9.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
9.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
9.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
9.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
9.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
9.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
9.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
9.0
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
9.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
9.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
8.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
8.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
8.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
8.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
8.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
8.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
8.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
8.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
8.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
8.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
8.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
8.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
8.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
8.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
8.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
8.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
8.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
8.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
8.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
8.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
8.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
8.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
7.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
7.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
7.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
7.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
7.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
7.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
7.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
7.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
7.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
7.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
7.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
7.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
7.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
7.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
7.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
7.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
7.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
7.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
7.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
7.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
7.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
7.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
7.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
7.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
7.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
7.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
7.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
7.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
7.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
7.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
7.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
7.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
7.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
6.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
6.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
6.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
6.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
6.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
6.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
6.8
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
6.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
6.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
6.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
6.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
6.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
6.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
6.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
6.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
6.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
6.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
6.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
6.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
6.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
6.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
6.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
5.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
5.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
4.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.