HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:6.0 nTPM
HPA Brain:33.7 nTPM
GTEx:6.0 nTPM
FANTOM5:40.3 Scaled Tags Per Million
Pig:38.9 nTPM
Mouse:24.7 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028926
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.7
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
1855 Male, age 76, left hemisphere 31.7
2621 Female, age 67, right hemisphere 30.2
1898 Male, age 80, left hemisphere 27.6
1911 Female, age 85, right hemisphere 26.0
2529 Female, age 94, left hemisphere 25.3
2148 Female, age 91, left hemisphere 25.0
Dentate gyrus
nTPM: 27.3
2531 Female, age 67, both hemispheres 43.2
2246 Female, age 85, both hemispheres 28.0
2010 Male, age 76, both hemispheres 27.5
1927 Female, age 91, both hemispheres 22.8
2528 Male, age 74, both hemispheres 22.3
2530 Female, age 94, left hemisphere 19.8
Entorhinal gyrus
nTPM: 27.7
1787 Male, age 76, left hemisphere 37.2
2613 Female, age 94, left hemisphere 28.1
2764 Male, age 80, right hemisphere 27.8
2117 Female, age 91, right hemisphere 26.7
2686 Male, age 75, right hemisphere 24.8
1938 Female, age 85, left hemisphere 21.6
Hippocampus, CA1
nTPM: 28.3
2045 Male, age 76, both hemispheres 66.1
1873 Female, age 85, both hemispheres 24.7
2527 Male, age 74, both hemispheres 19.7
2082 Female, age 91, right hemisphere 18.3
2749 Male, age 80, left hemisphere 12.8
Hippocampus, CA2
nTPM: 24.0
2437 Female, age 94, left hemisphere 32.7
1892 Male, age 76, both hemispheres 30.6
1940 Female, age 85, left hemisphere 22.5
2113 Female, age 91, right hemisphere 19.6
2249 Male, age 74, both hemispheres 19.5
1963 Male, age 80, left hemisphere 19.4
Hippocampus, CA3
nTPM: 33.7
2436 Male, age 74, both hemispheres 51.2
1891 Female, age 85, both hemispheres 35.1
2620 Female, age 94, left hemisphere 33.3
2861 Female, age 67, both hemispheres 32.6
1867 Male, age 76, both hemispheres 32.5
2137 Male, age 80, left hemisphere 17.1
Parahippocampal cortex
nTPM: 30.8
2693 Female, age 94, both hemispheres 43.9
2250 Female, age 67, right hemisphere 39.0
2532 Female, age 72, left hemisphere 32.7
2245 Female, age 91, both hemispheres 30.8
2018 Male, age 76, both hemispheres 30.1
1850 Male, age 80, both hemispheres 27.8
1990 Female, age 91, right hemisphere 27.7
1933 Female, age 85, both hemispheres 27.3
2622 Female, age 67, right hemisphere 24.8
2692 Male, age 74, both hemispheres 23.6
Perirhinal gyrus
nTPM: 33.0
2521 Female, age 94, right hemisphere 38.1
2848 Male, age 76, right hemisphere 38.0
1841 Female, age 85, right hemisphere 31.8
1794 Male, age 80, right hemisphere 30.6
1847 Female, age 91, left hemisphere 26.2
Subiculum
nTPM: 26.9
2438 Female, age 94, left hemisphere 32.1
1977 Female, age 85, both hemispheres 30.7
2619 Male, age 74, both hemispheres 28.0
1901 Male, age 80, both hemispheres 26.4
2729 Female, age 91, right hemisphere 24.5
2042 Male, age 76, both hemispheres 19.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.0
Samples: 197

Max nTPM: 14.0
Min nTPM: 2.0
Std nTPM: 2.4
Median nTPM: 5.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 14.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 13.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 13.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 13.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 12.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 11.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 11.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 11.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 10.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 10.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 10.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 40.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.3
FF:10153-102I9 76 years, female 46.5
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 38.9
Pig sample Sample description nTPM
Subiculum
nTPM: 38.9
Samples: 4

Max nTPM: 44.8
Min nTPM: 34.6
Sample A Female 44.8
Sample B Female 35.3
Sample C Male 40.9
Sample D Male 34.6
Dorsal hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 40.3
Min nTPM: 21.1
Sample A Female 24.0
Sample B Female 21.1
Sample C Male 40.3
Sample D Male 22.5
Entorhinal cortex
nTPM: 38.5
Samples: 4

Max nTPM: 45.1
Min nTPM: 33.8
Sample A Female 37.4
Sample B Female 33.8
Sample C Male 45.1
Sample D Male 37.8
Ventral hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 32.8
Min nTPM: 23.9
Sample A Female 28.5
Sample B Female 26.8
Sample C Male 32.8
Sample D Male 23.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.7
Samples: 4

Max nTPM: 27.9
Min nTPM: 22.1
Sample A Male 22.8
Sample B Male 25.8
Sample C Female 22.1
Sample D Female 27.9
Hippocampal formation
nTPM: 19.0
Samples: 4

Max nTPM: 22.3
Min nTPM: 16.4
Sample A Male 22.3
Sample B Male 18.9
Sample C Female 16.4
Sample D Female 18.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
73497168 Antisense, RP_051121_01_A11, Mouse strain C57BL/6J (56 days, male) 1.0
71488931 Antisense, RP_050825_03_C10, Mouse strain C57BL/6J (56 days, male) 0.0

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