We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PSMA4
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • PSMA4
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:66.1 nTPM
HPA:45.7 nTPM
GTEx:66.1 nTPM
FANTOM5:75.4 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA055466Antibody HPA060613Antibody CAB004973
Glandular cells MediumLowMedium





SALIVARY GLAND - TISSUE (MS)i

The MS-based protein data details section shows detailed information about the individual samples used for the relative protein abundance measurements.

Intensity values provides a relative protein abundance comparable between different genes and samples. All samples comes from one female donor. Median detection value represents the tissue for specificity and distribution categories. Protein detection is defined as a non-missing intensity value, and protein values are set to missing for a tissue if more than half of its replicates lacked a measurement for that protein.

Read more
Median intensity 35134488
Replicate Intensity
Salivary gland_01
33390467
Salivary gland_02
35134488
Salivary gland_03
36978949

SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.7
overview
Female, age 68
Salivary gland sample 216
nTPM: 50.9
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 42.2
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 43.9
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.1
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 66.1
Samples: 181

Max nTPM: 170.0
Min nTPM: 40.6
Std nTPM: 21.1
Median nTPM: 59.6
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 170.0
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 150.5
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 147.8
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 145.1
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 123.3
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 118.8
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 117.9
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 113.6
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 112.9
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 112.6
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 103.2
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 100.3
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 99.6
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 98.2
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 97.6
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 95.4
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 94.8
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 92.7
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 92.3
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 92.1
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 90.5
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 89.5
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 88.3
GTEX-1B932-0626-SM-731EM 40-49 years, female 86.8
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 86.3
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 83.1
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 82.6
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 81.5
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 80.8
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 78.8
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 77.8
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 77.2
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 77.0
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 76.8
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 75.7
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 75.6
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 75.5
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 75.0
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 74.6
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 74.4
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 74.3
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 72.4
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 72.4
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 72.4
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 72.4
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 72.3
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 71.7
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 71.5
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 70.9
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 70.8
GTEX-X261-2426-SM-4PQZU 50-59 years, male 70.5
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 70.4
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 70.0
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 69.6
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 69.6
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 68.7
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 68.1
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 68.0
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 67.9
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 67.9
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 67.1
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 67.0
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 66.8
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 66.7
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 66.2
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 66.2
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 65.7
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 65.7
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 65.7
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 65.4
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 64.8
GTEX-178AV-1426-SM-6LLID 40-49 years, male 64.7
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 64.7
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 64.6
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 64.4
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 63.4
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 63.3
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 63.2
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 63.0
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 62.6
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 61.9
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 61.8
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 61.6
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 61.2
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 61.2
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 61.2
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 60.9
GTEX-Y111-2626-SM-4TT24 50-59 years, male 60.9
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 60.4
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 60.2
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 59.6
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 59.4
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 59.4
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 59.3
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 59.3
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 59.3
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 59.3
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 59.1
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 58.8
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 58.8
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 58.5
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 57.7
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 57.6
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 57.5
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 57.4
GTEX-146FR-1226-SM-5MR78 60-69 years, female 57.3
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 57.3
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 57.1
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 57.0
GTEX-11P82-0926-SM-5986X 20-29 years, male 56.9
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 56.5
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 56.5
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 56.4
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 56.4
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 56.4
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 56.1
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 56.0
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 55.9
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 55.7
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 55.6
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 55.4
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 55.3
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 55.2
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 55.1
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 54.9
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 54.8
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 54.6
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 54.6
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 54.4
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 54.1
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 54.0
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 53.9
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 53.7
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 53.6
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 53.5
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 53.5
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 52.9
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 52.9
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 52.9
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 52.8
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 52.7
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 52.6
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 52.4
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 52.0
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 52.0
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 51.5
GTEX-1445S-2926-SM-5O993 60-69 years, male 51.4
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 51.4
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 51.2
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 50.6
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 50.1
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 50.0
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 49.9
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 48.7
GTEX-13O21-1926-SM-5MR39 50-59 years, male 48.7
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 48.6
GTEX-13113-1526-SM-5EGHV 60-69 years, female 48.3
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 47.9
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 47.8
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 47.4
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 47.2
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 47.1
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 47.0
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 46.9
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 46.8
GTEX-15SHV-2226-SM-6M464 60-69 years, male 46.5
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 46.3
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 45.7
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 45.6
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 45.3
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 45.0
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 44.3
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 43.9
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 43.5
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 43.3
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 42.2
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 41.7
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 41.4
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 41.4
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 41.1
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 40.6
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

75.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 61.0
FF:10199-103F1 23 years, male 61.0
Salivary gland
Scaled Tags Per Million: 75.4
FF:10093-102C3 16-60 years, mixed 75.4
Submaxillary gland
Scaled Tags Per Million: 65.4
FF:10202-103F4 24 years, male 65.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo