HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:22.4 nTPM
HPA Brain:60.9 nTPM
GTEx:22.4 nTPM
FANTOM5:31.3 Scaled Tags Per Million
Pig:32.3 nTPM
Mouse:13.5 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005992
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 60.9
Sample id Sample description nTPM
Hippocampus
nTPM: 56.3
1898 Male, age 80, left hemisphere 70.9
2148 Female, age 91, left hemisphere 64.3
1855 Male, age 76, left hemisphere 54.9
2529 Female, age 94, left hemisphere 53.3
2621 Female, age 67, right hemisphere 51.0
1911 Female, age 85, right hemisphere 43.3
Dentate gyrus
nTPM: 57.7
2528 Male, age 74, both hemispheres 69.0
2530 Female, age 94, left hemisphere 66.7
2010 Male, age 76, both hemispheres 57.7
1927 Female, age 91, both hemispheres 56.0
2246 Female, age 85, both hemispheres 51.1
2531 Female, age 67, both hemispheres 45.7
Entorhinal gyrus
nTPM: 57.3
2613 Female, age 94, left hemisphere 70.4
2117 Female, age 91, right hemisphere 59.9
2764 Male, age 80, right hemisphere 57.5
1938 Female, age 85, left hemisphere 57.0
1787 Male, age 76, left hemisphere 52.2
2686 Male, age 75, right hemisphere 46.8
Hippocampus, CA1
nTPM: 55.8
2749 Male, age 80, left hemisphere 66.4
1873 Female, age 85, both hemispheres 56.6
2527 Male, age 74, both hemispheres 56.2
2082 Female, age 91, right hemisphere 52.6
2045 Male, age 76, both hemispheres 47.1
Hippocampus, CA2
nTPM: 60.9
1963 Male, age 80, left hemisphere 68.2
2437 Female, age 94, left hemisphere 64.3
1892 Male, age 76, both hemispheres 62.5
2113 Female, age 91, right hemisphere 59.1
2249 Male, age 74, both hemispheres 58.8
1940 Female, age 85, left hemisphere 52.6
Hippocampus, CA3
nTPM: 56.1
2436 Male, age 74, both hemispheres 68.0
2620 Female, age 94, left hemisphere 61.7
2861 Female, age 67, both hemispheres 55.5
1867 Male, age 76, both hemispheres 53.1
2137 Male, age 80, left hemisphere 49.6
1891 Female, age 85, both hemispheres 48.8
Parahippocampal cortex
nTPM: 51.7
1990 Female, age 91, right hemisphere 61.2
1933 Female, age 85, both hemispheres 58.8
2245 Female, age 91, both hemispheres 53.5
2692 Male, age 74, both hemispheres 52.7
2250 Female, age 67, right hemisphere 52.1
1850 Male, age 80, both hemispheres 51.8
2622 Female, age 67, right hemisphere 49.8
2018 Male, age 76, both hemispheres 49.2
2532 Female, age 72, left hemisphere 44.8
2693 Female, age 94, both hemispheres 43.5
Perirhinal gyrus
nTPM: 57.2
1847 Female, age 91, left hemisphere 71.7
1794 Male, age 80, right hemisphere 66.3
2521 Female, age 94, right hemisphere 54.4
1841 Female, age 85, right hemisphere 52.7
2848 Male, age 76, right hemisphere 40.8
Subiculum
nTPM: 55.1
2729 Female, age 91, right hemisphere 66.2
2438 Female, age 94, left hemisphere 60.1
2619 Male, age 74, both hemispheres 58.3
1977 Female, age 85, both hemispheres 55.4
1901 Male, age 80, both hemispheres 50.2
2042 Male, age 76, both hemispheres 40.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 48.2
Min nTPM: 5.7
Std nTPM: 7.7
Median nTPM: 21.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 48.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 46.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 41.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 40.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 40.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 40.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 40.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 39.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 38.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 37.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 36.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 31.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.3
FF:10153-102I9 76 years, female 31.5
FF:10169-103B7 60 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.3
Pig sample Sample description nTPM
Subiculum
nTPM: 29.8
Samples: 4

Max nTPM: 44.2
Min nTPM: 23.2
Sample A Female 44.2
Sample B Female 23.2
Sample C Male 28.3
Sample D Male 23.5
Dorsal hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 45.2
Min nTPM: 20.9
Sample A Female 45.2
Sample B Female 32.2
Sample C Male 30.6
Sample D Male 20.9
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 34.9
Min nTPM: 24.5
Sample A Female 34.9
Sample B Female 26.4
Sample C Male 28.5
Sample D Male 24.5
Ventral hippocampus
nTPM: 32.3
Samples: 4

Max nTPM: 37.7
Min nTPM: 20.4
Sample A Female 33.5
Sample B Female 20.4
Sample C Male 37.5
Sample D Male 37.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 13.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 12.2
Min nTPM: 11.8
Sample A Male 12.2
Sample B Male 12.2
Sample C Female 11.8
Sample D Female 11.8
Hippocampal formation
nTPM: 13.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 12.1
Sample A Male 13.3
Sample B Male 13.6
Sample C Female 15.0
Sample D Female 12.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70528444 Antisense, RP_050623_02_F01, Mouse strain C57BL/6J (56 days, male) 0.3

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