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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF14 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
68.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
67.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
65.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
62.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
59.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
59.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
57.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
56.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
53.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
52.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
50.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
48.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
48.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
48.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
48.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
47.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
46.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
46.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
46.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
45.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
44.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
44.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
43.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
41.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
41.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
40.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
40.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
40.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
40.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
39.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
39.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
38.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
38.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
37.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
36.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
35.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
35.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
35.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
35.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
34.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
34.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
34.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
34.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
33.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
33.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
33.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
33.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
33.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
33.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
33.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
32.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
32.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
32.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
32.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
32.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
32.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
32.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
31.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
31.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
31.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
31.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
31.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
30.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
30.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
30.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
30.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
30.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
30.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
30.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
30.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
30.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
30.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
30.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
29.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
29.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
29.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
29.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
29.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
29.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
29.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
28.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
28.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
28.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
28.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
27.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
27.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
27.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
27.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
27.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
27.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
27.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
27.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
27.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
26.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
26.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
26.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
26.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
26.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
25.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
25.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
25.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
25.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
25.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
25.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
25.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
25.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
25.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
25.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
25.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
25.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
25.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
24.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
24.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
24.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
24.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
24.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
24.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
24.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
24.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
24.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
24.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
24.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
23.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
23.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
23.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
23.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
23.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
23.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
23.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
23.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
23.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
23.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
23.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
23.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
23.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
23.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
23.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
22.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
22.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
22.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
22.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
22.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
22.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
22.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
22.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
22.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
22.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
22.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
22.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
22.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
21.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
21.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
21.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
21.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
21.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
21.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
21.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
21.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
21.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
21.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
21.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
21.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
21.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
21.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
21.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
21.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
20.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
20.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
20.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
20.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
20.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
20.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
20.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
20.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
20.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
20.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
19.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
19.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
19.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
19.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
19.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
19.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
19.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
19.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
19.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
19.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
18.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
18.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
18.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
18.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
18.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
18.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
18.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
18.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
18.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
18.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
18.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
18.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
18.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
18.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
18.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
18.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
18.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
18.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
18.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
18.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
17.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
17.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
17.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
17.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
17.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
17.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
17.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
17.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
16.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
16.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
16.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
16.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
16.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
16.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
16.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
16.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
16.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
16.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
16.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
16.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
16.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
16.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
16.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
16.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
16.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
15.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
15.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
15.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
15.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
15.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
15.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
15.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
15.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
15.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
15.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
14.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
14.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
14.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
14.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
14.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
14.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
14.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
14.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
14.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
14.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
14.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
14.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
14.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
14.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
14.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
13.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
13.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
13.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
13.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
13.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
13.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
13.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
13.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
13.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
13.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
13.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
13.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
13.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
13.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
13.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
12.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
12.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
12.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
12.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
12.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
12.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
12.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
12.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
12.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
12.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
12.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
11.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
11.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
11.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
11.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
11.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
11.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
11.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
10.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
10.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
10.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
10.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
9.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
9.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
9.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
8.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
8.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
8.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
7.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
7.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
6.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RNF14 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.4
Number of samples
231
Samples
Sample
Description
TPM
DO45119
0 years, male, NA, stage:3, dead, 510 days
39.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
34.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
30.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
30.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
27.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
27.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
25.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
24.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
24.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
24.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
23.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
22.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
22.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
22.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
21.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
21.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
20.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
20.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
20.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
20.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
20.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
19.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
19.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
19.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
19.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
19.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
18.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
18.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
18.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
18.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
18.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
17.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
17.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
17.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
17.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
17.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
17.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
17.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
17.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
17.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
16.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
16.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
16.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
16.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
16.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
16.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
16.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
16.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
16.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
16.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
16.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
16.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
16.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
16.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
15.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
15.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
15.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
15.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
15.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
15.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
15.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
15.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
15.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
15.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
15.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
14.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
14.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
14.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
14.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
14.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
14.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
14.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
14.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
14.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
13.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
13.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
13.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
13.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
13.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
13.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
13.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
13.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
13.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
13.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
13.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
13.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
13.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
13.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
12.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
12.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
12.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
12.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
12.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
12.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
12.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
12.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
12.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
12.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
12.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
12.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
12.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
12.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
12.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
11.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
11.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
11.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
11.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
11.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
11.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
11.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
11.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
11.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
11.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
11.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
11.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
11.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
11.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
11.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
11.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
11.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
11.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
11.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
11.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
10.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
10.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
10.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
10.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
10.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
10.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
10.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
10.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
10.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
10.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
10.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
10.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
9.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
9.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
9.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
9.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
9.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
8.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
8.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
8.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
7.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
7.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
6.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
6.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
6.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
5.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
5.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1027
Tumor
0.9
745
Tumor
0.9
617
Tumor
0.9
147
Tumor
0.8
353
Tumor
0.8
777
Tumor
0.6
955
Tumor
0.6
223
Tumor
0.6
925
Tumor
0.5
952
Normal
0.5
482
Normal
0.5
123
Tumor
0.5
1021
Tumor
0.5
523
Tumor
0.5
436
Normal
0.5
518
Normal
0.5
1043
Tumor
0.4
533
Tumor
0.4
728
Normal
0.4
261
Tumor
0.4
911
Tumor
0.4
714
Normal
0.4
481
Tumor
0.4
1026
Normal
0.4
472
Normal
0.4
861
Tumor
0.4
738
Normal
0.4
1022
Normal
0.4
982
Normal
0.4
824
Normal
0.4
851
Tumor
0.4
571
Tumor
0.3
462
Normal
0.3
742
Normal
0.3
554
Normal
0.3
484
Normal
0.3
723
Tumor
0.3
448
Normal
0.3
513
Tumor
0.3
755
Tumor
0.3
1013
Tumor
0.3
483
Tumor
0.3
914
Normal
0.3
746
Normal
0.3
515
Tumor
0.3
978
Normal
0.3
196
Normal
0.3
698
Normal
0.3
1016
Normal
0.3
298
Normal
0.3
411
Tumor
0.3
918
Normal
0.3
366
Normal
0.3
286
Normal
0.3
878
Normal
0.3
1025
Tumor
0.3
451
Tumor
0.3
1045
Tumor
0.3
966
Normal
0.3
161
Tumor
0.3
473
Tumor
0.3
965
Tumor
0.3
494
Normal
0.3
128
Normal
0.3
222
Normal
0.3
882
Normal
0.3
327
Tumor
0.2
866
Normal
0.2
546
Normal
0.2
362
Normal
0.2
616
Normal
0.2
1046
Normal
0.2
491
Tumor
0.2
956
Normal
0.2
722
Normal
0.2
1014
Normal
0.2
568
Normal
0.2
132
Normal
0.2
915
Tumor
0.2
516
Normal
0.2
713
Tumor
0.2
696
Normal
0.2
355
Tumor
0.2
864
Normal
0.2
415
Tumor
0.2
858
Normal
0.2
138
Normal
0.2
716
Normal
0.2
456
Normal
0.2
874
Normal
0.2
328
Normal
0.2
148
Normal
0.2
816
Normal
0.2
564
Normal
0.2
923
Tumor
0.2
937
Tumor
0.2
416
Normal
0.2
356
Normal
0.2
186
Normal
0.2
664
Normal
0.2
865
Tumor
0.2
756
Normal
0.2
924
Normal
0.2
1028
Normal
0.2
474
Normal
0.2
957
Tumor
0.2
636
Normal
0.2
778
Normal
0.2
818
Normal
0.2
446
Normal
0.2
862
Normal
0.2
136
Normal
0.2
557
Tumor
0.2
912
Normal
0.2
258
Normal
0.2
426
Normal
0.2
464
Normal
0.2
467
Tumor
0.2
868
Normal
0.2
162
Normal
0.2
111
Normal
0.2
228
Normal
0.2
628
Normal
0.2
412
Normal
0.1
452
Normal
0.1
1042
Normal
0.1
212
Normal
0.1
884
Normal
0.1
435
Tumor
0.1
257
Tumor
0.1
191
Tumor
0.1
916
Normal
0.1
666
Normal
0.1
926
Normal
0.1
432
Normal
0.1
278
Normal
0.1
358
Normal
0.1
526
Normal
0.1
262
Normal
0.1
981
Tumor
0.1
422
Normal
0.1
414
Normal
0.1
1032
Normal
0.1
466
Normal
0.1
493
Tumor
0.1
852
Normal
0.1
984
Normal
0.1
913
Tumor
0.1
272
Normal
0.1
534
Normal
0.1
284
Normal
0.1
113
Tumor
0.1
525
Tumor
0.1
572
Normal
0.1
424
Normal
0.1
312
Normal
0.1
376
Normal
0.1
648
Normal
0.1
558
Normal
0.1
428
Normal
0.1
618
Normal
0.1
114
Normal
0.1
214
Normal
0.1
232
Normal
0.1
468
Normal
0.1
231
Tumor
0.1
172
Normal
0.1
528
Normal
0.1
642
Normal
0.1
922
Normal
0.1
514
Normal
0.1
188
Normal
0.1
627
Tumor
0.1
574
Normal
0.0
314
Normal
0.0
964
Normal
0.0
126
Normal
0.0
944
Normal
0.0
431
Tumor
0.0
195
Tumor
0.0
744
Normal
0.0
1044
Normal
0.0
823
Tumor
0.0
142
Normal
0.0
461
Tumor
0.0
786
Normal
0.0
1041
Tumor
0.0
341
Tumor
0.0
785
Tumor
0.0
213
Tumor
0.0
141
Tumor
0.0
224
Normal
0.0
867
Tumor
0.0
492
Normal
0.0
145
Tumor
0.0
662
Normal
0.0
938
Normal
0.0
488
Normal
0.0
563
Tumor
0.0
497
Tumor
0.0
342
Normal
0.0
686
Normal
-0.1
364
Normal
-0.1
737
Tumor
-0.1
423
Tumor
-0.1
368
Normal
-0.1
218
Normal
-0.1
386
Normal
-0.1
277
Tumor
-0.1
146
Normal
-0.1
727
Tumor
-0.1
641
Tumor
-0.1
857
Tumor
-0.1
538
Normal
-0.1
697
Tumor
-0.1
921
Tumor
-0.1
951
Tumor
-0.1
553
Tumor
-0.1
332
Normal
-0.1
465
Tumor
-0.1
695
Tumor
-0.1
615
Tumor
-0.1
536
Normal
-0.1
396
Normal
-0.1
124
Normal
-0.1
445
Tumor
-0.1
434
Normal
-0.1
976
Normal
-0.1
517
Tumor
-0.1
477
Tumor
-0.1
567
Tumor
-0.1
127
Tumor
-0.1
354
Normal
-0.1
487
Tumor
-0.1
268
Normal
-0.2
724
Normal
-0.2
537
Tumor
-0.2
635
Tumor
-0.2
478
Normal
-0.2
365
Tumor
-0.2
968
Normal
-0.2
394
Normal
-0.2
873
Tumor
-0.2
392
Normal
-0.2
1031
Tumor
-0.2
421
Tumor
-0.2
388
Normal
-0.2
817
Tumor
-0.2
137
Tumor
-0.2
427
Tumor
-0.2
344
Normal
-0.2
267
Tumor
-0.2
361
Tumor
-0.2
958
Normal
-0.2
672
Normal
-0.2
352
Normal
-0.2
498
Normal
-0.2
975
Tumor
-0.2
524
Normal
-0.2
863
Tumor
-0.2
953
Tumor
-0.2
383
Tumor
-0.2
954
Normal
-0.3
131
Tumor
-0.3
545
Tumor
-0.3
171
Tumor
-0.3
363
Tumor
-0.3
135
Tumor
-0.3
283
Tumor
-0.3
663
Tumor
-0.3
527
Tumor
-0.3
444
Normal
-0.3
391
Tumor
-0.3
963
Tumor
-0.3
313
Tumor
-0.3
395
Tumor
-0.3
715
Tumor
-0.3
285
Tumor
-0.3
471
Tumor
-0.3
221
Tumor
-0.3
227
Tumor
-0.3
881
Tumor
-0.3
447
Tumor
-0.4
384
Normal
-0.4
455
Tumor
-0.4
647
Tumor
-0.4
433
Tumor
-0.4
187
Tumor
-0.4
192
Normal
-0.4
883
Tumor
-0.4
977
Tumor
-0.4
535
Tumor
-0.4
393
Tumor
-0.4
185
Tumor
-0.4
211
Tumor
-0.4
375
Tumor
-0.5
413
Tumor
-0.5
665
Tumor
-0.5
573
Tumor
-0.5
311
Tumor
-0.5
443
Tumor
-0.5
721
Tumor
-0.5
217
Tumor
-0.5
815
Tumor
-0.5
112
Tumor
-0.6
385
Tumor
-0.6
1015
Tumor
-0.6
814
Normal
-0.6
917
Tumor
-0.6
967
Tumor
-0.6
271
Tumor
-0.6
331
Tumor
-0.7
351
Tumor
-0.7
661
Tumor
-0.7
983
Tumor
-0.7
741
Tumor
-0.7
813
Tumor
-0.7
943
Tumor
-0.7
125
Tumor
-0.7
425
Tumor
-0.8
685
Tumor
-0.8
463
Tumor
-0.8
387
Tumor
-0.8
343
Tumor
-0.9
877
Tumor
-1.0
743
Tumor
-1.0
357
Tumor
-1.0
671
Tumor
-1.0
367
Tumor
-1.0
297
Tumor
-1.1
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.