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  • TISSUE

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  • CD9
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:87.7 nTPM
GTEx:186.2 nTPM
FANTOM5:89.5 Scaled Tags Per Million
Pig:120.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.7
Sample id Sample description nTPM
Putamen
nTPM: 87.7
2482 Female, age 94, left hemisphere 148.0
1829 Male, age 74, unknown 113.4
2466 Female, age 79, unknown 83.9
2489 Female, age 72, unknown 79.6
1937 Female, age 91, right hemisphere 78.8
2647 Male, age 75, left hemisphere 61.0
1838 Male, age 80, right hemisphere 49.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 186.2
Samples: 254

Max nTPM: 589.7
Min nTPM: 38.4
Std nTPM: 71.1
Median nTPM: 181.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 589.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 489.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 412.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 386.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 324.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 318.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 317.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 312.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 312.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 311.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 304.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 301.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 297.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 296.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 294.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 294.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 293.9
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 289.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 287.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 287.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 284.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 283.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 280.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 279.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 278.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 278.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 278.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 275.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 274.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 274.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 263.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 263.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 263.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 262.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 261.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 261.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 260.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 259.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 258.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 256.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 255.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 253.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 246.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 245.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 244.6
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 243.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 242.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 240.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 240.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 238.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 237.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 236.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 233.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 233.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 232.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 232.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 231.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 231.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 230.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 227.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 223.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 222.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 222.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 221.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 220.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 220.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 219.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 218.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 217.9
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 217.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 216.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 216.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 215.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 215.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 213.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 213.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 212.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 212.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 212.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 211.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 211.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 210.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 210.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 209.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 209.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 208.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 208.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 208.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 207.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 206.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 206.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 205.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 203.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 202.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 202.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 202.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 202.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 202.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 201.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 199.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 199.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 198.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 198.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 197.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 196.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 196.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 193.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 192.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 191.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 190.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 190.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 189.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 187.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 187.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 187.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 187.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 186.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 186.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 185.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 185.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 185.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 184.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 183.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 183.0
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 182.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 182.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 182.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 180.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 178.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 176.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 175.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 173.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 173.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 173.3
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 172.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 171.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 171.0
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 169.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 168.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 168.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 168.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 168.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 168.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 165.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 165.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 165.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 165.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 164.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 164.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 163.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 163.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 163.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 162.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 162.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 161.4
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 160.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 160.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 160.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 159.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 157.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 156.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 155.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 155.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 154.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 153.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 152.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 151.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 151.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 150.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 149.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 149.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 148.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 148.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 148.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 147.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 147.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 146.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 146.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 145.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 145.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 144.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 144.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 144.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 143.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 142.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 142.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 141.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 140.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 140.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 139.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 139.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 137.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 137.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 137.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 137.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 136.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 136.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 135.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 134.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 133.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 132.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 130.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 128.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 127.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 125.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 125.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 124.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 123.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 120.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 120.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 119.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 119.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 117.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 117.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 117.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 115.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 114.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 113.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 113.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 112.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 112.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 112.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 111.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 110.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 110.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 109.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 109.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 108.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 107.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 103.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 103.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 101.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 101.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 100.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 100.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 99.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 98.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 98.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 96.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 95.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 94.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 88.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 87.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 82.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 80.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 80.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 79.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 72.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 71.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 64.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 51.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 49.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 46.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 38.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

89.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 89.5
FF:10176-103C5 60 years, female 89.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.0
Pig sample Sample description nTPM
Putamen
nTPM: 120.0
Samples: 4

Max nTPM: 214.4
Min nTPM: 57.7
Sample A Female 214.4
Sample B Female 57.7
Sample C Male 91.8
Sample D Male 116.2

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