HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:36.2 nTPM
HPA Brain:12.7 nTPM
GTEx:36.2 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:73.3 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047377
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 12.7
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
1898 Male, age 80, left hemisphere 14.4
1911 Female, age 85, right hemisphere 11.3
1855 Male, age 76, left hemisphere 10.3
2529 Female, age 94, left hemisphere 9.8
2621 Female, age 67, right hemisphere 9.3
2148 Female, age 91, left hemisphere 8.4
Dentate gyrus
nTPM: 11.6
2010 Male, age 76, both hemispheres 13.7
2528 Male, age 74, both hemispheres 12.0
1927 Female, age 91, both hemispheres 11.7
2246 Female, age 85, both hemispheres 11.4
2531 Female, age 67, both hemispheres 10.4
2530 Female, age 94, left hemisphere 10.2
Entorhinal gyrus
nTPM: 9.9
1938 Female, age 85, left hemisphere 12.0
1787 Male, age 76, left hemisphere 11.3
2764 Male, age 80, right hemisphere 10.6
2117 Female, age 91, right hemisphere 10.4
2686 Male, age 75, right hemisphere 7.8
2613 Female, age 94, left hemisphere 7.2
Hippocampus, CA1
nTPM: 12.5
2749 Male, age 80, left hemisphere 16.4
2045 Male, age 76, both hemispheres 14.5
1873 Female, age 85, both hemispheres 11.5
2527 Male, age 74, both hemispheres 10.2
2082 Female, age 91, right hemisphere 10.0
Hippocampus, CA2
nTPM: 11.6
1892 Male, age 76, both hemispheres 15.5
1963 Male, age 80, left hemisphere 13.3
2249 Male, age 74, both hemispheres 11.4
2437 Female, age 94, left hemisphere 10.0
2113 Female, age 91, right hemisphere 9.7
1940 Female, age 85, left hemisphere 9.4
Hippocampus, CA3
nTPM: 12.7
1867 Male, age 76, both hemispheres 18.9
2137 Male, age 80, left hemisphere 15.0
2620 Female, age 94, left hemisphere 11.9
2436 Male, age 74, both hemispheres 11.7
1891 Female, age 85, both hemispheres 11.1
2861 Female, age 67, both hemispheres 7.5
Parahippocampal cortex
nTPM: 10.4
1850 Male, age 80, both hemispheres 12.8
2018 Male, age 76, both hemispheres 11.6
1933 Female, age 85, both hemispheres 11.2
2693 Female, age 94, both hemispheres 11.2
2250 Female, age 67, right hemisphere 10.4
1990 Female, age 91, right hemisphere 10.1
2692 Male, age 74, both hemispheres 10.0
2532 Female, age 72, left hemisphere 9.9
2245 Female, age 91, both hemispheres 9.5
2622 Female, age 67, right hemisphere 7.7
Perirhinal gyrus
nTPM: 11.9
1841 Female, age 85, right hemisphere 12.8
1794 Male, age 80, right hemisphere 12.3
1847 Female, age 91, left hemisphere 12.1
2848 Male, age 76, right hemisphere 11.4
2521 Female, age 94, right hemisphere 10.7
Subiculum
nTPM: 10.6
1977 Female, age 85, both hemispheres 12.9
2042 Male, age 76, both hemispheres 11.8
1901 Male, age 80, both hemispheres 11.7
2729 Female, age 91, right hemisphere 10.1
2619 Male, age 74, both hemispheres 8.8
2438 Female, age 94, left hemisphere 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.2
Samples: 197

Max nTPM: 88.7
Min nTPM: 20.9
Std nTPM: 9.5
Median nTPM: 35.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 88.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 75.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 71.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 62.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 59.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 57.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 52.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 51.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 51.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 51.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 51.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.2
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 19.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.1
Pig sample Sample description nTPM
Subiculum
nTPM: 22.7
Samples: 4

Max nTPM: 27.6
Min nTPM: 18.8
Sample A Female 27.6
Sample B Female 22.7
Sample C Male 18.8
Sample D Male 21.6
Dorsal hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 28.2
Min nTPM: 21.5
Sample A Female 28.2
Sample B Female 22.9
Sample C Male 24.1
Sample D Male 21.5
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 28.8
Min nTPM: 20.4
Sample A Female 25.7
Sample B Female 28.8
Sample C Male 25.5
Sample D Male 20.4
Ventral hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 24.0
Min nTPM: 21.0
Sample A Female 24.0
Sample B Female 21.0
Sample C Male 21.9
Sample D Male 21.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 73.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.1
Samples: 4

Max nTPM: 74.0
Min nTPM: 55.9
Sample A Male 73.1
Sample B Male 74.0
Sample C Female 73.2
Sample D Female 55.9
Hippocampal formation
nTPM: 73.3
Samples: 4

Max nTPM: 93.1
Min nTPM: 63.3
Sample A Male 93.1
Sample B Male 63.3
Sample C Female 69.7
Sample D Female 67.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
68545450 Antisense, RP_050120_01_A03, Mouse strain C57BL/6J (56 days, male) 2.2

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