HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:54.4 nTPM
HPA Brain:58.1 nTPM
GTEx:54.4 nTPM
FANTOM5:23.4 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:90.6 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004847
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 58.1
Sample id Sample description nTPM
Hippocampus
nTPM: 52.5
2621 Female, age 67, right hemisphere 60.7
2148 Female, age 91, left hemisphere 57.9
2529 Female, age 94, left hemisphere 55.9
1898 Male, age 80, left hemisphere 55.3
1911 Female, age 85, right hemisphere 46.9
1855 Male, age 76, left hemisphere 38.5
Dentate gyrus
nTPM: 52.9
2531 Female, age 67, both hemispheres 64.0
1927 Female, age 91, both hemispheres 59.9
2530 Female, age 94, left hemisphere 58.9
2528 Male, age 74, both hemispheres 53.7
2246 Female, age 85, both hemispheres 45.5
2010 Male, age 76, both hemispheres 35.3
Entorhinal gyrus
nTPM: 51.5
2613 Female, age 94, left hemisphere 81.8
2686 Male, age 75, right hemisphere 56.3
2764 Male, age 80, right hemisphere 52.5
1787 Male, age 76, left hemisphere 43.6
1938 Female, age 85, left hemisphere 42.5
2117 Female, age 91, right hemisphere 32.5
Hippocampus, CA1
nTPM: 53.7
2749 Male, age 80, left hemisphere 78.8
2527 Male, age 74, both hemispheres 68.7
1873 Female, age 85, both hemispheres 46.1
2082 Female, age 91, right hemisphere 41.8
2045 Male, age 76, both hemispheres 32.8
Hippocampus, CA2
nTPM: 53.0
2437 Female, age 94, left hemisphere 72.0
1963 Male, age 80, left hemisphere 71.3
1892 Male, age 76, both hemispheres 56.1
2249 Male, age 74, both hemispheres 49.5
2113 Female, age 91, right hemisphere 40.8
1940 Female, age 85, left hemisphere 28.1
Hippocampus, CA3
nTPM: 58.1
2861 Female, age 67, both hemispheres 79.4
2137 Male, age 80, left hemisphere 73.2
2620 Female, age 94, left hemisphere 67.7
1867 Male, age 76, both hemispheres 46.6
2436 Male, age 74, both hemispheres 42.0
1891 Female, age 85, both hemispheres 39.4
Parahippocampal cortex
nTPM: 46.8
2245 Female, age 91, both hemispheres 62.7
1990 Female, age 91, right hemisphere 52.9
2622 Female, age 67, right hemisphere 52.8
2693 Female, age 94, both hemispheres 50.0
2250 Female, age 67, right hemisphere 49.4
2692 Male, age 74, both hemispheres 46.2
2532 Female, age 72, left hemisphere 43.1
1933 Female, age 85, both hemispheres 37.2
1850 Male, age 80, both hemispheres 37.1
2018 Male, age 76, both hemispheres 36.2
Perirhinal gyrus
nTPM: 44.4
1847 Female, age 91, left hemisphere 55.1
2521 Female, age 94, right hemisphere 46.4
1794 Male, age 80, right hemisphere 43.4
1841 Female, age 85, right hemisphere 39.1
2848 Male, age 76, right hemisphere 38.2
Subiculum
nTPM: 46.8
2438 Female, age 94, left hemisphere 57.8
2619 Male, age 74, both hemispheres 55.3
1901 Male, age 80, both hemispheres 47.8
1977 Female, age 85, both hemispheres 44.6
2729 Female, age 91, right hemisphere 40.4
2042 Male, age 76, both hemispheres 34.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 54.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.4
Samples: 197

Max nTPM: 153.0
Min nTPM: 3.5
Std nTPM: 28.1
Median nTPM: 53.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 153.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 141.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 139.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 135.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 107.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 107.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 105.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 103.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 103.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 102.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 102.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 23.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.4
FF:10153-102I9 76 years, female 28.1
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 18.4
Pig sample Sample description nTPM
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 22.7
Min nTPM: 12.0
Sample A Female 22.7
Sample B Female 16.2
Sample C Male 14.0
Sample D Male 12.0
Dorsal hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 11.3
Sample A Female 16.4
Sample B Female 22.1
Sample C Male 11.3
Sample D Male 23.7
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 20.3
Min nTPM: 14.6
Sample A Female 15.2
Sample B Female 16.2
Sample C Male 20.3
Sample D Male 14.6
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 19.8
Min nTPM: 12.0
Sample A Female 12.0
Sample B Female 18.3
Sample C Male 19.8
Sample D Male 18.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 90.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.1
Samples: 4

Max nTPM: 88.3
Min nTPM: 75.2
Sample A Male 84.8
Sample B Male 88.3
Sample C Female 80.1
Sample D Female 75.2
Hippocampal formation
nTPM: 90.6
Samples: 4

Max nTPM: 93.7
Min nTPM: 87.0
Sample A Male 91.3
Sample B Male 93.7
Sample C Female 87.0
Sample D Female 90.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
76135823 Antisense, RP_060711_04_D03, Mouse strain C57BL/6J (56 days, male) 18.0
69752089 Antisense, RP_050505_01_B03, Mouse strain C57BL/6J (56 days, male) 17.6

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