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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM5 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
44.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
32.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
32.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
30.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
30.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
30.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
28.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
26.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
26.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
26.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
26.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
26.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
24.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
24.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
23.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
23.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
23.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
22.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
22.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
22.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
22.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
22.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
22.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
21.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
21.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
21.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
21.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
21.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
21.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
21.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
20.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
20.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
20.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
20.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
20.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
20.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
19.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
19.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
19.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
19.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
19.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
19.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
19.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
19.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
19.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
19.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
18.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
18.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
18.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
18.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
18.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
18.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
18.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
17.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
17.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
17.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
17.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
17.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
17.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
17.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
17.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
17.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
17.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
17.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
16.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
16.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
16.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
16.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
16.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
16.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
16.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
16.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
16.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
16.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
15.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
15.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
15.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
15.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
15.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
15.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
15.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
15.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
15.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
15.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
15.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
15.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
15.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
14.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
14.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
14.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
14.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
14.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
14.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
14.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
14.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
14.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
14.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
14.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
14.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
14.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
14.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
14.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
14.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
14.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
13.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
13.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
13.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
13.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
13.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
13.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
13.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
13.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
13.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
13.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
13.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
13.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
13.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
13.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
13.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
13.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
12.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
12.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
12.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
12.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
12.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
12.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
12.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
12.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
12.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
12.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
12.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
12.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
12.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
12.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
12.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
12.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
12.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
12.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
11.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
11.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
11.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
11.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
11.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
11.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
11.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
11.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
11.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
11.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
11.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
11.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
11.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
10.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
10.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
10.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
10.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
10.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
10.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
10.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
10.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
10.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
10.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
10.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
9.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
9.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
9.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
9.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
9.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
9.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
9.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
9.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
9.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
9.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
9.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
9.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
9.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
8.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
8.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
8.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
8.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
8.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
8.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
7.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
7.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
7.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
7.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
7.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
7.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
7.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
7.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
7.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
7.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.9
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
6.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
5.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RBM5 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.5
Number of samples
231
Samples
Sample
Description
TPM
DO23547
0 years, male, NA, stage:1, alive, 1020 days
113.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
106.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
103.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
97.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
96.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
89.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
87.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
85.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
75.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
72.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
68.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
68.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
65.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
64.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
63.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
62.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
61.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
61.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
60.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
58.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
58.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
58.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
57.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
56.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
56.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
56.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
55.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
55.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
55.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
54.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
54.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
54.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
53.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
53.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
53.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
52.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
52.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
52.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
52.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
52.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
50.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
50.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
49.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
48.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
48.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
47.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
47.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
47.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
45.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
45.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
45.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
45.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
44.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
44.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
44.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
44.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
43.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
43.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
43.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
43.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
43.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
43.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
42.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
42.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
42.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
42.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
41.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
41.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
41.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
41.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
41.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
41.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
41.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
41.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
40.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
40.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
40.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
40.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
39.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
39.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
39.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
39.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
38.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
38.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
38.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
38.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
38.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
38.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
37.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
37.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
37.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
37.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
37.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
37.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
37.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
37.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
36.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
36.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
36.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
36.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
36.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
36.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
36.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
36.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
36.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
36.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
35.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
35.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
35.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
35.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
35.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
35.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
35.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
34.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
34.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
34.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
34.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
34.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
34.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
34.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
34.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
34.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
34.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
33.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
33.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
33.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
33.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
33.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
33.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
33.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
33.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
33.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
33.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
33.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
32.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
32.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
32.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
32.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
32.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
32.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
32.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
32.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
32.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
32.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
32.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
32.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
32.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
32.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
31.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
31.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
31.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
31.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
31.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
31.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
31.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
31.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
30.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
30.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
30.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
30.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
30.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
30.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
30.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
30.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
29.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
29.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
29.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
29.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
29.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
29.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
29.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
29.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
28.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
28.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
28.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
28.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
28.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
28.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
28.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
28.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
28.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
28.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
27.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
27.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
27.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
27.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
27.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
27.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
27.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
26.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
26.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
26.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
26.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
26.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
26.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
26.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
25.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
25.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
25.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
25.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
25.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
25.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
24.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
24.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
24.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
24.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
23.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
23.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
23.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
23.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
23.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
22.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
22.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
22.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
21.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
21.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
20.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
20.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
20.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
19.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
19.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
18.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
17.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
17.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
17.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
16.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
13.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
12.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
5.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
965
Tumor
1.0
517
Tumor
0.7
951
Tumor
0.7
695
Tumor
0.7
533
Tumor
0.7
497
Tumor
0.7
535
Tumor
0.6
211
Tumor
0.6
131
Tumor
0.6
983
Tumor
0.5
1031
Tumor
0.5
331
Tumor
0.5
537
Tumor
0.5
285
Tumor
0.5
743
Tumor
0.5
355
Tumor
0.5
487
Tumor
0.5
411
Tumor
0.4
161
Tumor
0.4
937
Tumor
0.4
367
Tumor
0.4
815
Tumor
0.4
413
Tumor
0.4
473
Tumor
0.4
385
Tumor
0.4
737
Tumor
0.4
1041
Tumor
0.4
523
Tumor
0.4
785
Tumor
0.4
425
Tumor
0.4
953
Tumor
0.4
553
Tumor
0.4
955
Tumor
0.4
536
Normal
0.4
883
Tumor
0.4
957
Tumor
0.4
865
Tumor
0.4
483
Tumor
0.4
661
Tumor
0.4
383
Tumor
0.3
923
Tumor
0.3
881
Tumor
0.3
877
Tumor
0.3
313
Tumor
0.3
471
Tumor
0.3
977
Tumor
0.3
513
Tumor
0.3
1025
Tumor
0.3
524
Normal
0.3
297
Tumor
0.3
727
Tumor
0.3
554
Normal
0.3
477
Tumor
0.3
525
Tumor
0.3
415
Tumor
0.3
943
Tumor
0.3
467
Tumor
0.3
641
Tumor
0.3
1021
Tumor
0.3
227
Tumor
0.3
975
Tumor
0.3
498
Normal
0.3
921
Tumor
0.3
283
Tumor
0.3
351
Tumor
0.3
341
Tumor
0.3
817
Tumor
0.3
777
Tumor
0.2
492
Normal
0.2
917
Tumor
0.2
755
Tumor
0.2
715
Tumor
0.2
665
Tumor
0.2
515
Tumor
0.2
867
Tumor
0.2
135
Tumor
0.2
1045
Tumor
0.2
963
Tumor
0.2
538
Normal
0.2
913
Tumor
0.2
534
Normal
0.2
447
Tumor
0.2
663
Tumor
0.2
1015
Tumor
0.2
481
Tumor
0.2
925
Tumor
0.2
814
Normal
0.2
954
Normal
0.2
526
Normal
0.2
141
Tumor
0.2
137
Tumor
0.2
482
Normal
0.2
142
Normal
0.2
455
Tumor
0.2
922
Normal
0.2
857
Tumor
0.2
271
Tumor
0.2
984
Normal
0.2
461
Tumor
0.1
488
Normal
0.1
615
Tumor
0.1
647
Tumor
0.1
528
Normal
0.1
357
Tumor
0.1
563
Tumor
0.1
756
Normal
0.1
1026
Normal
0.1
484
Normal
0.1
958
Normal
0.1
744
Normal
0.1
185
Tumor
0.1
478
Normal
0.1
363
Tumor
0.1
966
Normal
0.1
915
Tumor
0.1
956
Normal
0.1
786
Normal
0.1
1014
Normal
0.1
221
Tumor
0.1
472
Normal
0.1
546
Normal
0.1
384
Normal
0.1
696
Normal
0.1
938
Normal
0.1
976
Normal
0.1
571
Tumor
0.1
516
Normal
0.1
714
Normal
0.1
944
Normal
0.1
778
Normal
0.1
818
Normal
0.1
1046
Normal
0.1
698
Normal
0.1
924
Normal
0.1
375
Tumor
0.1
918
Normal
0.1
981
Tumor
0.1
364
Normal
0.1
445
Tumor
0.1
463
Tumor
0.1
616
Normal
0.1
952
Normal
0.1
213
Tumor
0.1
267
Tumor
0.1
866
Normal
0.1
858
Normal
0.1
412
Normal
0.1
491
Tumor
0.1
878
Normal
0.1
573
Tumor
0.1
435
Tumor
0.1
724
Normal
0.1
721
Tumor
0.1
416
Normal
0.1
431
Tumor
0.1
926
Normal
0.1
112
Tumor
0.1
617
Tumor
0.1
1043
Tumor
0.1
387
Tumor
0.1
391
Tumor
0.1
366
Normal
0.1
884
Normal
0.1
433
Tumor
0.1
916
Normal
0.1
968
Normal
0.1
1042
Normal
0.1
514
Normal
0.1
864
Normal
0.1
874
Normal
0.1
685
Tumor
0.1
686
Normal
0.1
558
Normal
0.1
746
Normal
0.1
964
Normal
0.1
223
Tumor
0.1
851
Tumor
0.1
494
Normal
0.1
911
Tumor
0.1
474
Normal
0.1
664
Normal
0.1
636
Normal
0.1
967
Tumor
0.1
728
Normal
0.1
261
Tumor
0.1
113
Tumor
0.1
557
Tumor
0.1
868
Normal
0.1
716
Normal
0.1
978
Normal
0.0
1032
Normal
0.0
545
Tumor
0.0
365
Tumor
0.0
912
Normal
0.0
361
Tumor
0.0
493
Tumor
0.0
518
Normal
0.0
443
Tumor
0.0
327
Tumor
0.0
882
Normal
0.0
146
Normal
0.0
742
Normal
0.0
672
Normal
0.0
873
Tumor
0.0
862
Normal
0.0
1016
Normal
0.0
1022
Normal
0.0
328
Normal
0.0
823
Tumor
0.0
286
Normal
0.0
277
Tumor
0.0
465
Tumor
0.0
824
Normal
0.0
258
Normal
0.0
628
Normal
0.0
666
Normal
0.0
1028
Normal
0.0
232
Normal
0.0
671
Tumor
0.0
311
Tumor
0.0
1044
Normal
0.0
396
Normal
0.0
224
Normal
0.0
362
Normal
0.0
635
Tumor
0.0
982
Normal
0.0
217
Tumor
0.0
662
Normal
0.0
448
Normal
0.0
272
Normal
0.0
564
Normal
0.0
352
Normal
0.0
171
Tumor
0.0
268
Normal
0.0
722
Normal
0.0
187
Tumor
0.0
191
Tumor
0.0
436
Normal
0.0
228
Normal
0.0
527
Tumor
0.0
427
Tumor
0.0
648
Normal
0.0
128
Normal
0.0
572
Normal
0.0
312
Normal
0.0
861
Tumor
0.0
697
Tumor
0.0
852
Normal
0.0
574
Normal
0.0
395
Tumor
0.0
145
Tumor
0.0
284
Normal
0.0
342
Normal
0.0
212
Normal
-0.1
627
Tumor
-0.1
434
Normal
-0.1
353
Tumor
-0.1
462
Normal
-0.1
138
Normal
-0.1
567
Tumor
-0.1
123
Tumor
-0.1
451
Tumor
-0.1
863
Tumor
-0.1
713
Tumor
-0.1
298
Normal
-0.1
642
Normal
-0.1
127
Tumor
-0.1
132
Normal
-0.1
1013
Tumor
-0.1
257
Tumor
-0.1
192
Normal
-0.1
618
Normal
-0.1
738
Normal
-0.1
914
Normal
-0.1
813
Tumor
-0.1
444
Normal
-0.1
262
Normal
-0.1
386
Normal
-0.1
456
Normal
-0.1
723
Tumor
-0.1
432
Normal
-0.1
423
Tumor
-0.1
428
Normal
-0.1
816
Normal
-0.1
376
Normal
-0.1
126
Normal
-0.1
358
Normal
-0.1
568
Normal
-0.1
218
Normal
-0.1
136
Normal
-0.1
466
Normal
-0.1
446
Normal
-0.1
356
Normal
-0.1
111
Normal
-0.1
368
Normal
-0.1
745
Tumor
-0.1
222
Normal
-0.1
464
Normal
-0.2
392
Normal
-0.2
332
Normal
-0.2
468
Normal
-0.2
393
Tumor
-0.2
114
Normal
-0.2
426
Normal
-0.2
424
Normal
-0.2
188
Normal
-0.2
195
Tumor
-0.2
196
Normal
-0.2
314
Normal
-0.2
422
Normal
-0.2
147
Tumor
-0.2
278
Normal
-0.2
394
Normal
-0.2
214
Normal
-0.2
1027
Tumor
-0.2
186
Normal
-0.2
388
Normal
-0.2
124
Normal
-0.2
741
Tumor
-0.2
414
Normal
-0.2
148
Normal
-0.2
231
Tumor
-0.2
452
Normal
-0.2
344
Normal
-0.3
343
Tumor
-0.3
354
Normal
-0.3
421
Tumor
-0.3
162
Normal
-0.3
125
Tumor
-0.3
172
Normal
-0.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.