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The search result lists the genes found by the search function.
The show/hide columns function can be used to customize the columns in the search result list.
To refine the search results with specific criterias, use the "Fields". For more information and examples see the Search help.
Data for all genes included in the search result can be downloaded in different formats, links are found in the upper right corner of the search result page:
XML - An XML-file with more extensive data (including antigen sequences, protein expression, transcriptomics data, external references and more (see XSD)) for up to 10000 genes.
TSV - Tab-separated file with a subset of the data available in the XML-file
JSON - JSON formatted file with the same subset of the data available in the TSV-file
Custom - Custom dataset defined by the user in TSV or JSON format. Useful if you only need some of the data columns available in the TSV/JSON format
1. Select data columns:i
Change the selections below to determine which columns to have in the final file. The ensembl gene id is always added to have a identifier present in the output.
A whole group can be selected/unselected as well as individual data columns by toggling the checkboxes.
This paragraph provides an overview of proteins elevated in brain from a whole body perspective and proteins elevated in regions of the brain from a whole brain perspective.
Protein classi
Protein class(es) of the gene product according to selected gene lists. List of protein classes.
Biological processi
Keywords assigned by UniProt to proteins because they are involved in a particular biological process.
Molecular functioni
Keywords assigned by UniProt to proteins due to their particular molecular function.
Disease involvementi
Disease related keywords assigned by UniProt combined with Cancer-related genes and FDA approved drug targets
Protein evidence scores are generated from several independent sources and are classified as evidence at i) protein level, ii) transcript level, iii) no evidence, or iv) not available.
Antibodies used for immunohistochemistry (results presented in Tissue, Cancer and Brain resource) and immunocytochemistry/IF (results presented in Subcellular resource) assays.
Reliability (IH)i
Reliability score, divided into Enhanced, Supported, Approved, or Uncertain, is evaluated in normal tissues and based on consistency between antibody staining pattern, available RNA-Seq and gene/protein characterization data, as well as similarity between independent antibodies targeting the same protein.
Reliability (Mouse Brain)i
Reliability score, divided into Supported or Uncertain, is set for all genes and indicates the level of reliability of the analyzed protein expression pattern based on available protein/RNA/gene characterization data.
Reliability (IF)i
Reliability score, divided into Enhanced, Supported, Approved, or Uncertain, is evaluated in cell lines and based on consistency between antibody staining pattern, available RNA-Seq and gene/protein characterization data, as well as similarity between independent antibodies targeting the same protein.
All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:
secreted into blood
locally secreted in a tissue or from a cell type
or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Cell Cycle Dependent Proteini
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Cell Cycle Dependent Transcripti
Cell cycle dependency of RNA expression in the FUCCI u-2 OS cell line, determined by RNA sequencing and monitoring of cell cycle stage in single cells. Genes encoding assayed transcripts are classified as CCD transcript "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Blood expression cluster
Tissue expression cluster
Brain expression cluster
Cell line expression cluster
Single cell expression cluster
Num protein interactions
Subcellular main location
Subcellular additional location
Antibody RRIDi
All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:
secreted into blood
locally secreted in a tissue or from a cell type
or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Breast Invasive Carcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Breast Invasive Carcinoma (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Colon Adenocarcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Colon Adenocarcinoma (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Glioblastoma Multiforme (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Glioblastoma Multiforme (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Head and Neck Squamous Cell Carcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Kidney Chromophobe (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Kidney Renal Clear Cell Carcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Kidney Renal Clear Cell Carcinoma (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Kidney Renal Papillary Cell Carcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Liver Hepatocellular Carcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Liver Hepatocellular Carcinoma (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Lung Adenocarcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Lung Adenocarcinoma (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Lung Squamous Cell Carcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Lung Squamous Cell Carcinoma (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Ovary Serous Cystadenocarcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Ovary Serous Cystadenocarcinoma (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Pancreatic Adenocarcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Pancreatic Adenocarcinoma (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Prostate Adenocarcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Rectum Adenocarcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Rectum Adenocarcinoma (validation)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Skin Cutaneous Melanoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Stomach Adenocarcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Testicular Germ Cell Tumor (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Thyroid Carcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Uterine Corpus Endometrial Carcinoma (TCGA)i
Cell cycle dependency of protein expression in the FUCCI U-2 OS cell line, determined by ICC-IF and monitoring of cell cycle stage in single cells. Genes encoding assayed proteins are classified as CCD protein "Yes" or "No", while a lack of classification indicates that data on cell cycle dependency is lacking.
Clicking one of the Downlod boxes will download a file in the corresponding format with the selected data columns for the genes shown in the search result.
The copy boxes will give you a link to the file if you want to share it or save for later as a reference.
The Human Protein Atlas project is funded
