Immune cell summary

Table 1. The expression profiles for the different cell lineages are presented including the classification based on cell lineage specificity

Cell lineage
No of cell types analyzed
No of cell lineage enriched genes
No of cell lineage group enriched genes
No of cell lineage enhanced genes
Total number of cell lineage elevated genes
No of elevated genes with highest expression in blood or lymphoid tissues
Number of cell lineage enriched genes with highest expression in blood or lymphoid tissues
B-cells 2 3012806587 226 149
T-cells 7 46044515920 275 171
NK-cells 1 652761342 89 10
Monocytes 3 1326206758 108 14
Granulocytes 3 1007640151662 136 59
Dendritic cells 2 2325825819 117 18

Table 2. The expression profiles for the 18 individual cell types are also presented including the classification based on cell type specificity

Cell type
Cell lineage
No of cell type enriched genes
No of cell type group enriched genes
No of cell type enhanced genes
Total number of cell type elevated genes
No of elevated genes with highest expression in blood or lymphoid tissues
Number of cell type enriched genes with highest expression in blood or lymphoid tissues
Memory B-cell B-cells 2336795485 205 4
Naive B-cell B-cells 20367114501 205 6
Myeloid DC Dendritic cells 2826382373 64 4
Plasmacytoid DC Dendritic cells 186177198561 71 12
Basophil Granulocytes 260269398927 49 5
Eosinophil Granulocytes 74289209572 57 3
Neutrophil Granulocytes 2353304691034 114 27
Classical monocyte Monocytes 1028580375 59 0
Intermediate monocyte Monocytes 130080381 71 1
Non-classical monocyte Monocytes 24272157453 68 0
NK-cell NK-cells 65151111327 69 10
GdT-cell T-cells 1314174228 74 5
MAIT T-cell T-cells 2715463244 85 3
Memory CD4 T-cell T-cells 222125248 122 0
Memory CD8 T-cell T-cells 023018248 126 0
Naive CD4 T-cell T-cells 120484289 126 0
Naive CD8 T-cell T-cells 824129278 121 0
T-reg T-cells 36223172431 187 8