HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:59.7 nTPM
HPA Brain:52.1 nTPM
GTEx:59.7 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:32.6 nTPM
Mouse:53.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043986
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 52.1
Sample id Sample description nTPM
Hippocampus
nTPM: 47.1
1898 Male, age 80, left hemisphere 58.8
1855 Male, age 76, left hemisphere 55.7
2621 Female, age 67, right hemisphere 48.0
1911 Female, age 85, right hemisphere 47.9
2529 Female, age 94, left hemisphere 37.2
2148 Female, age 91, left hemisphere 35.2
Dentate gyrus
nTPM: 44.3
1927 Female, age 91, both hemispheres 62.8
2010 Male, age 76, both hemispheres 53.8
2530 Female, age 94, left hemisphere 43.4
2531 Female, age 67, both hemispheres 39.6
2246 Female, age 85, both hemispheres 36.5
2528 Male, age 74, both hemispheres 29.6
Entorhinal gyrus
nTPM: 44.6
2613 Female, age 94, left hemisphere 54.6
2764 Male, age 80, right hemisphere 51.4
1938 Female, age 85, left hemisphere 48.8
1787 Male, age 76, left hemisphere 47.6
2686 Male, age 75, right hemisphere 40.9
2117 Female, age 91, right hemisphere 24.3
Hippocampus, CA1
nTPM: 46.8
2749 Male, age 80, left hemisphere 69.8
1873 Female, age 85, both hemispheres 49.1
2045 Male, age 76, both hemispheres 48.4
2082 Female, age 91, right hemisphere 35.3
2527 Male, age 74, both hemispheres 31.2
Hippocampus, CA2
nTPM: 46.7
2437 Female, age 94, left hemisphere 69.6
1892 Male, age 76, both hemispheres 63.2
1963 Male, age 80, left hemisphere 46.5
1940 Female, age 85, left hemisphere 38.4
2249 Male, age 74, both hemispheres 34.3
2113 Female, age 91, right hemisphere 28.4
Hippocampus, CA3
nTPM: 51.5
1867 Male, age 76, both hemispheres 60.4
2436 Male, age 74, both hemispheres 55.1
2137 Male, age 80, left hemisphere 54.5
2620 Female, age 94, left hemisphere 50.7
1891 Female, age 85, both hemispheres 46.5
2861 Female, age 67, both hemispheres 42.1
Parahippocampal cortex
nTPM: 44.1
1850 Male, age 80, both hemispheres 55.4
1933 Female, age 85, both hemispheres 55.2
2018 Male, age 76, both hemispheres 49.5
2622 Female, age 67, right hemisphere 48.3
2693 Female, age 94, both hemispheres 43.5
1990 Female, age 91, right hemisphere 42.8
2532 Female, age 72, left hemisphere 38.4
2245 Female, age 91, both hemispheres 38.3
2250 Female, age 67, right hemisphere 35.0
2692 Male, age 74, both hemispheres 34.4
Perirhinal gyrus
nTPM: 52.1
1847 Female, age 91, left hemisphere 67.0
1794 Male, age 80, right hemisphere 59.1
1841 Female, age 85, right hemisphere 51.3
2521 Female, age 94, right hemisphere 42.0
2848 Male, age 76, right hemisphere 41.0
Subiculum
nTPM: 45.9
2438 Female, age 94, left hemisphere 70.8
1901 Male, age 80, both hemispheres 50.7
2042 Male, age 76, both hemispheres 48.5
1977 Female, age 85, both hemispheres 39.2
2619 Male, age 74, both hemispheres 37.0
2729 Female, age 91, right hemisphere 29.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 59.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.7
Samples: 255

Max nTPM: 183.8
Min nTPM: 17.6
Std nTPM: 27.0
Median nTPM: 54.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 183.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 166.8
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 145.0
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 144.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 140.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 138.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 135.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 133.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 126.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 123.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 122.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 28.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.6
Pig sample Sample description nTPM
Subiculum
nTPM: 28.1
Samples: 4

Max nTPM: 42.0
Min nTPM: 22.0
Sample A Female 42.0
Sample B Female 25.6
Sample C Male 22.6
Sample D Male 22.0
Dorsal hippocampus
nTPM: 30.2
Samples: 4

Max nTPM: 40.2
Min nTPM: 19.2
Sample A Female 40.2
Sample B Female 27.0
Sample C Male 34.3
Sample D Male 19.2
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 39.4
Min nTPM: 26.9
Sample A Female 31.3
Sample B Female 39.4
Sample C Male 33.0
Sample D Male 26.9
Ventral hippocampus
nTPM: 26.4
Samples: 4

Max nTPM: 31.3
Min nTPM: 20.2
Sample A Female 25.7
Sample B Female 20.2
Sample C Male 31.3
Sample D Male 28.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 53.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.7
Samples: 4

Max nTPM: 58.2
Min nTPM: 49.4
Sample A Male 49.5
Sample B Male 49.4
Sample C Female 57.7
Sample D Female 58.2
Hippocampal formation
nTPM: 53.8
Samples: 4

Max nTPM: 59.9
Min nTPM: 48.7
Sample A Male 59.9
Sample B Male 48.9
Sample C Female 57.8
Sample D Female 48.7

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