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TISSUE PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:9.8 nTPM
GTEx:18.3 nTPM
FANTOM5:9.8 Scaled Tags Per Million
Pig:2.7 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.8
Sample id Sample description nTPM
Putamen
nTPM: 9.8
2489 Female, age 72, unknown 14.2
2482 Female, age 94, left hemisphere 12.2
2647 Male, age 75, left hemisphere 10.4
2466 Female, age 79, unknown 9.1
1937 Female, age 91, right hemisphere 8.0
1829 Male, age 74, unknown 7.8
1838 Male, age 80, right hemisphere 6.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 18.3
Samples: 254

Max nTPM: 71.1
Min nTPM: 5.2
Std nTPM: 11.1
Median nTPM: 14.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 71.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 70.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 57.1
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 57.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 54.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 51.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 48.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 45.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 45.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 43.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 42.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 41.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 40.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 40.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 39.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 38.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 38.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 37.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 35.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 35.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 35.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 35.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 34.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 34.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 34.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 33.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 33.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 32.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 31.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 31.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 30.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 30.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 29.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 29.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 29.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 29.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 29.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 28.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 28.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 28.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 27.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 27.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 27.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 26.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 26.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 26.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 26.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 25.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 25.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 25.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 25.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 25.1
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 25.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 24.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 24.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 24.3
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 24.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 24.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 24.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 23.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 22.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 22.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 22.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 22.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 22.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 22.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 22.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 22.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 21.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 21.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 21.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 21.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 21.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 20.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 20.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 20.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 20.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 20.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 20.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 19.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 19.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 19.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 19.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 19.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 19.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 19.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 18.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 18.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 18.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 18.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 18.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 18.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 17.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 17.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 17.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 17.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 17.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 17.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 17.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 17.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 17.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 17.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 16.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 16.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 16.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 16.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 16.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 16.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 15.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 15.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 15.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 15.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 15.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 15.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 15.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 15.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 15.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 15.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 15.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 15.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 15.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 15.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 14.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 14.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 14.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 14.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 14.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 14.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 14.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 14.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 14.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 14.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 14.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 14.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 14.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 14.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 14.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 14.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 14.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 13.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 13.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 13.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 13.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 13.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 13.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 13.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 13.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 13.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 13.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 12.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 12.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 12.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 12.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 12.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 12.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 12.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 12.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 12.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 12.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 12.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 12.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 12.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 12.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 12.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 12.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 12.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 12.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 12.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 12.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 12.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 12.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 12.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 12.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 12.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 12.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 11.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 11.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 11.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 11.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 11.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 11.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 11.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 11.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 11.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 11.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 11.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 11.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 11.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 11.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 10.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 10.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 10.9
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 10.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 10.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 10.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 10.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 10.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 10.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 9.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 9.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 9.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 9.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 9.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 9.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 9.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 9.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 9.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 9.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 9.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 9.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 8.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 8.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 8.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 8.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 8.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 8.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 8.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 8.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 8.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 8.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 8.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 8.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 8.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 8.2
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 8.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 8.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 7.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 7.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 7.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 7.9
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 7.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 7.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 7.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 7.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 7.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 7.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 7.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 7.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 7.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 7.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 7.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 7.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 7.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 7.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 7.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 6.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 6.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 6.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 6.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 6.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 5.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

9.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 9.8
FF:10176-103C5 60 years, female 9.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.7
Pig sample Sample description nTPM
Putamen
nTPM: 2.7
Samples: 4

Max nTPM: 7.8
Min nTPM: 0.0
Sample A Female 7.8
Sample B Female 0.6
Sample C Male 2.4
Sample D Male 0.0

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