We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MT-ATP8
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • MT-ATP8
TISSUE AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Amygdala
Tissue methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:132058.2 nTPM
HPA Brain:51777.4 nTPM
GTEx:132058.2 nTPM
Pig:47425.1 nTPM
Mouse:16459.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51777.4
Sample id Sample description nTPM
Amygdala
nTPM: 38447.4
2695 Female, age 67, right hemisphere 60496.4
2514 Male, age 75, right hemisphere 48491.1
2814 Male, age 76, right hemisphere 35454.7
2517 Female, age 94, left hemisphere 34062.6
1987 Female, age 91, left hemisphere 13732.4
Basal amygdala
nTPM: 41813.9
2827 Female, age 67, right hemisphere 71057.5
2243 Female, age 91, right hemisphere 48289.5
1955 Male, age 76, both hemispheres 38700.9
2685 Female, age 94, left hemisphere 38049.0
2609 Male, age 75, right hemisphere 32991.0
2110 Male, age 80, left hemisphere 21795.3
Central amygdala
nTPM: 45165.6
2826 Female, age 94, left hemisphere 58182.2
2239 Male, age 80, left hemisphere 55673.4
2515 Male, age 75, right hemisphere 40621.6
2701 Female, age 91, right hemisphere 40282.2
1905 Male, age 76, both hemispheres 31068.4
Corticomedial amygdala
nTPM: 51777.4
2535 Female, age 67, right hemisphere 87094.6
2240 Male, age 76, both hemispheres 83912.6
2242 Female, age 91, right hemisphere 51620.6
2428 Male, age 75, right hemisphere 34139.9
2829 Male, age 80, left hemisphere 27270.5
2429 Female, age 94, left hemisphere 26626.0
Lateral amygdala
nTPM: 45481.7
2830 Female, age 67, right hemisphere 63966.8
2256 Male, age 80, left hemisphere 49155.7
2255 Female, age 91, right hemisphere 47830.1
2516 Male, age 75, right hemisphere 45541.8
2534 Female, age 94, left hemisphere 43509.2
1883 Male, age 76, both hemispheres 22886.8

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132058.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 132058.2
Samples: 181

Max nTPM: 643121.6
Min nTPM: 22259.3
Std nTPM: 94230.8
Median nTPM: 103126.7
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 643121.6
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 491606.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 429762.3
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 408069.0
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 399333.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 391871.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 370400.2
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 359560.3
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 328119.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 310634.3
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 297639.4
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 294112.2
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 291550.3
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 280656.5
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 270635.8
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 269879.6
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 269667.3
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 266847.2
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 262097.5
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 248675.1
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 244143.9
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 232815.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 229296.4
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 223676.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 218178.4
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 216297.6
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 212838.6
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 210653.1
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 206902.8
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 206163.0
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 201952.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 194985.4
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 193200.1
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 188015.8
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 186138.5
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 185429.5
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 183889.6
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 176575.6
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 170101.7
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 167860.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 164590.4
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 163208.6
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 162932.3
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 161018.4
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 159791.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 158405.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 156915.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 155949.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 155876.6
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 153600.2
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 153219.5
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 153121.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 152713.6
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 152657.8
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 146449.8
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 145540.2
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 145048.1
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 142498.4
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 142265.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 139739.0
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 138196.6
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 137161.3
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 136619.8
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 133657.2
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 132602.3
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 130573.6
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 127760.0
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 125677.6
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 123980.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 121770.3
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 121603.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 118984.6
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 115303.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 114608.6
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 114150.5
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 113899.3
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 111233.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 111181.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 109879.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 109828.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 109256.9
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 108993.9
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 108187.5
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 108140.8
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 108114.3
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 106817.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 106472.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 105802.3
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 105557.3
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 105223.0
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 103126.7
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 102972.8
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 102811.6
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 102559.4
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 102105.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 101302.2
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 100174.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 99705.8
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 98273.0
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 98130.7
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 97558.1
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 97457.1
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 97269.5
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 97106.2
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 96731.3
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 96689.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 95338.3
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 95074.6
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 94230.7
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 93659.7
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 91098.8
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 90842.9
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 90380.3
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 89157.3
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 88724.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 87631.6
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 87629.6
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 87153.9
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 86422.3
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 85986.4
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 85814.8
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 85565.1
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 84680.5
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 82598.6
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 81529.8
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 81247.5
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 80749.0
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 80064.9
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 79934.7
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 79829.9
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 79702.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 79485.8
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 78920.3
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 78489.8
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 77202.1
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 77000.8
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 76404.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 72299.7
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 72221.0
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 67367.1
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 65548.5
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 65184.4
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 64180.5
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 64155.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 64132.9
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 62680.8
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 62351.1
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 60258.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 60172.9
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 60121.8
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 58056.0
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 57910.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 57369.7
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 56220.4
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 56166.2
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 56047.2
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 55312.1
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 52581.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 50948.6
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 50184.7
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 48614.4
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 48272.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 48150.8
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 46235.6
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 45824.7
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 45565.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 44256.3
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 43454.4
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 43137.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 42123.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 34796.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 33564.1
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 32617.8
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 31196.5
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 28789.3
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 27681.7
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 26910.0
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 25539.5
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 23086.3
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 22322.5
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 22259.3
Show allShow less

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47425.1
Pig sample Sample description nTPM
Amygdala
nTPM: 47425.1
Samples: 4

Max nTPM: 67429.3
Min nTPM: 17412.3
Sample A Female 48297.6
Sample B Female 67429.3
Sample C Male 56561.1
Sample D Male 17412.3

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16459.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 16459.3
Samples: 4

Max nTPM: 22601.8
Min nTPM: 13064.2
Sample A Male 14103.7
Sample B Male 16067.4
Sample C Female 22601.8
Sample D Female 13064.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo