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  • TISSUE

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  • TMX2
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:56.8 nTPM
GTEx:66.9 nTPM
FANTOM5:132.0 Scaled Tags Per Million
Pig:82.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.8
Sample id Sample description nTPM
Putamen
nTPM: 56.8
2482 Female, age 94, left hemisphere 67.5
2466 Female, age 79, unknown 63.9
1937 Female, age 91, right hemisphere 57.8
1838 Male, age 80, right hemisphere 56.9
1829 Male, age 74, unknown 53.7
2647 Male, age 75, left hemisphere 52.3
2489 Female, age 72, unknown 45.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 66.9
Samples: 254

Max nTPM: 112.9
Min nTPM: 38.4
Std nTPM: 13.2
Median nTPM: 65.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 112.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 111.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 111.1
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 103.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 100.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 97.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 95.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 95.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 94.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 93.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 92.2
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 91.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 91.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 90.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 90.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 89.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 89.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 89.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 89.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 87.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 87.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 86.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 86.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 85.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 85.6
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 85.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 85.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 84.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 84.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 83.3
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 82.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 82.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 82.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 82.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 82.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 81.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 81.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 80.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 80.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 79.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 79.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 79.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 78.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 78.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 78.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 78.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 78.3
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 78.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 78.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 78.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 78.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 78.0
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 77.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 77.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 77.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 76.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 76.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 76.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 76.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 76.0
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 75.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 75.8
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 75.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 75.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 75.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 75.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 74.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 74.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 74.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 73.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 73.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 73.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 72.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 72.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 71.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 71.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 71.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 71.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 70.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 70.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 70.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 70.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 70.5
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 70.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 70.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 70.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 70.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 69.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 69.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 69.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 69.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 69.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 69.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 69.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 68.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 68.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 68.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 68.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 68.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 68.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 68.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 68.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 68.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 67.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 67.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 67.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 66.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 66.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 66.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 66.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 66.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 66.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 66.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 66.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 65.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 65.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 65.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 65.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 65.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 65.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 65.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 65.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 65.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 65.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 65.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 65.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 65.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 64.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 64.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 64.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 64.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 64.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 63.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 63.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 63.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 63.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 63.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 63.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 63.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 63.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 63.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 63.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 62.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 62.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 62.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 62.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 62.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 62.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 62.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 62.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 62.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 61.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 61.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 61.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 61.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 61.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 61.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 61.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 60.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 60.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 60.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 60.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 60.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 60.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 60.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 60.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 60.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 60.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 60.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 59.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 59.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 59.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 59.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 59.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 59.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 59.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 58.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 58.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 58.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 58.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 58.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 58.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 58.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 58.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 58.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 58.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 57.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 57.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 57.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 57.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 57.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 57.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 56.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 56.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 56.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 56.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 56.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 56.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 56.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 56.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 55.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 55.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 55.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 55.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 55.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 55.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 55.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 55.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 54.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 54.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 54.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 54.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 54.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 53.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 53.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 53.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 53.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 53.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 53.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 53.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 53.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 53.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 52.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 52.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 52.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 52.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 52.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 52.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 52.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 51.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 51.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 51.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 49.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 49.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 48.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 48.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 47.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 47.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 47.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 46.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 46.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 46.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 44.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 44.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 43.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 43.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 43.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 41.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 38.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

132.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 132.0
FF:10176-103C5 60 years, female 132.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.2
Pig sample Sample description nTPM
Putamen
nTPM: 82.2
Samples: 4

Max nTPM: 108.2
Min nTPM: 66.4
Sample A Female 74.7
Sample B Female 66.4
Sample C Male 108.2
Sample D Male 79.4

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