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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
512.9
nTPM
Monaco:
268.2
nTPM
Schmiedel:
69.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
512.9
HPA sample
nTPM
gdT-cell nTPM: 512.9
Samples: 6
Max nTPM: 604.5
Min nTPM: 444.8
P10809_1007
452.6
P10809_1022
585.5
P10809_1041
604.5
P10809_1060
456.1
P10809_1077
444.8
P10809_1098
534.1
MAIT T-cell nTPM: 377.3
Samples: 6
Max nTPM: 409.8
Min nTPM: 317.8
P10809_1006
317.8
P10809_1024
377.8
P10809_1043
409.8
P10809_1062
365.9
P10809_1083
400.6
P10809_1097
391.6
Memory CD4 T-cell nTPM: 399.2
Samples: 6
Max nTPM: 453.6
Min nTPM: 345.0
P10809_1014
345.0
P10809_1026
453.6
P10809_1045
346.6
P10809_1064
422.0
P10809_1086
399.9
P10809_1113
428.0
Memory CD8 T-cell nTPM: 437.4
Samples: 5
Max nTPM: 486.2
Min nTPM: 388.5
P10809_1012
388.5
P10809_1027
453.6
P10809_1046
486.2
P10809_1065
426.7
P10809_1111
431.9
Naive CD4 T-cell nTPM: 327.2
Samples: 6
Max nTPM: 369.1
Min nTPM: 261.0
P10809_1015
261.0
P10809_1030
329.5
P10809_1049
353.5
P10809_1068
296.7
P10809_1085
369.1
P10809_1112
353.3
Naive CD8 T-cell nTPM: 365.7
Samples: 6
Max nTPM: 475.2
Min nTPM: 290.2
P10809_1016
290.2
P10809_1031
358.2
P10809_1050
326.9
P10809_1069
475.2
P10809_1087
414.1
P10809_1110
329.7
T-reg nTPM: 497.4
Samples: 6
Max nTPM: 601.1
Min nTPM: 419.8
P10809_1018
451.8
P10809_1037
419.8
P10809_1056
467.8
P10809_1075
468.9
P10809_1094
601.1
P10809_1106
575.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
268.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 142.7
Samples: 4
Max nTPM: 216.8
Min nTPM: 87.6
RHH5202_R3573
167.6
RHH5230_R3602
87.6
RHH5259_R3631
98.8
RHH5288_R3660
216.8
Effector memory CD8 T-cell nTPM: 165.0
Samples: 4
Max nTPM: 248.2
Min nTPM: 120.5
RHH5203_R3574
248.2
RHH5231_R3603
163.9
RHH5260_R3632
127.3
RHH5289_R3661
120.5
MAIT T-cell nTPM: 152.4
Samples: 4
Max nTPM: 198.6
Min nTPM: 112.5
RHH5233_R3605
151.7
RHH5205_R3576
112.5
RHH5262_R3634
146.9
RHH5297_R3663
198.6
Memory CD4 T-cell TFH nTPM: 203.5
Samples: 4
Max nTPM: 280.5
Min nTPM: 131.0
RHH5300_R3666
189.6
RHH5236_R3608
280.5
RHH5265_R3637
131.0
RHH5208_R3579
213.0
Memory CD4 T-cell Th1 nTPM: 189.7
Samples: 4
Max nTPM: 311.6
Min nTPM: 136.1
RHH5210_R3581
163.7
RHH5302_R3668
311.6
RHH5238_R3610
136.1
RHH5267_R3639
147.2
Memory CD4 T-cell Th1/Th17 nTPM: 194.3
Samples: 4
Max nTPM: 282.1
Min nTPM: 83.9
RHH5303_R3669
282.1
RHH5211_R3582
276.0
RHH5239_R3611
83.9
RHH5268_R3640
135.2
Memory CD4 T-cell Th17 nTPM: 141.8
Samples: 4
Max nTPM: 259.9
Min nTPM: 80.9
RHH5304_R3670
131.9
RHH5212_R3583
259.9
RHH5240_R3612
94.6
RHH5269_R3641
80.9
Memory CD4 T-cell Th2 nTPM: 159.0
Samples: 4
Max nTPM: 179.0
Min nTPM: 118.5
RHH5305_R3671
179.0
RHH5213_R3584
164.1
RHH5241_R3613
174.5
RHH5270_R3642
118.5
Naive CD4 T-cell nTPM: 158.1
Samples: 4
Max nTPM: 262.3
Min nTPM: 86.1
RHH5306_R3672
163.4
RHH5214_R3585
262.3
RHH5242_R3614
120.6
RHH5271_R3643
86.1
Naive CD8 T-cell nTPM: 116.3
Samples: 4
Max nTPM: 155.1
Min nTPM: 45.2
RHH5201_R3572
155.1
RHH5229_R3601
45.2
RHH5258_R3630
155.0
RHH5287_R3659
109.7
Non-Vd2 gdTCR nTPM: 215.9
Samples: 4
Max nTPM: 359.4
Min nTPM: 88.2
RHH5235_R3607
88.2
RHH5264_R3636
239.6
RHH5207_R3578
176.2
RHH5299_R3665
359.4
T-reg nTPM: 193.3
Samples: 4
Max nTPM: 242.4
Min nTPM: 117.1
RHH5301_R3667
242.4
RHH5237_R3609
238.0
RHH5266_R3638
117.1
RHH5209_R3580
175.5
Terminal effector memory CD4 T-cell nTPM: 144.9
Samples: 2
Max nTPM: 177.5
Min nTPM: 112.2
RHH5243_R3615
112.2
RHH5272_R3644
177.5
Terminal effector memory CD8 T-cell nTPM: 268.2
Samples: 4
Max nTPM: 474.5
Min nTPM: 154.2
RHH5232_R3604
180.5
RHH5204_R3575
474.5
RHH5261_R3633
154.2
RHH5296_R3662
263.5
Vd2 gdTCR nTPM: 224.8
Samples: 4
Max nTPM: 368.0
Min nTPM: 126.9
RHH5234_R3606
126.9
RHH5206_R3577
368.0
RHH5263_R3635
130.4
RHH5298_R3664
274.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.