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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
724.2
nTPM
Monaco:
2341.2
nTPM
Schmiedel:
3519.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
724.2
HPA sample
nTPM
gdT-cell nTPM: 724.2
Samples: 6
Max nTPM: 1149.4
Min nTPM: 11.4
P10809_1007
1043.9
P10809_1022
1149.4
P10809_1041
980.1
P10809_1060
11.4
P10809_1077
14.3
P10809_1098
1146.0
MAIT T-cell nTPM: 602.0
Samples: 6
Max nTPM: 1079.2
Min nTPM: 11.6
P10809_1006
1079.2
P10809_1024
871.1
P10809_1043
741.7
P10809_1062
11.6
P10809_1083
12.0
P10809_1097
896.2
Memory CD4 T-cell nTPM: 540.7
Samples: 6
Max nTPM: 908.6
Min nTPM: 14.0
P10809_1014
882.6
P10809_1026
788.2
P10809_1045
634.8
P10809_1064
16.0
P10809_1086
14.0
P10809_1113
908.6
Memory CD8 T-cell nTPM: 708.7
Samples: 5
Max nTPM: 1081.4
Min nTPM: 16.9
P10809_1012
1081.4
P10809_1027
861.9
P10809_1046
733.1
P10809_1065
16.9
P10809_1111
850.2
Naive CD4 T-cell nTPM: 532.4
Samples: 6
Max nTPM: 966.7
Min nTPM: 11.2
P10809_1015
787.1
P10809_1030
749.0
P10809_1049
668.5
P10809_1068
11.2
P10809_1085
11.6
P10809_1112
966.7
Naive CD8 T-cell nTPM: 548.9
Samples: 6
Max nTPM: 868.8
Min nTPM: 12.5
P10809_1016
868.8
P10809_1031
858.5
P10809_1050
684.7
P10809_1069
12.6
P10809_1087
12.5
P10809_1110
856.2
T-reg nTPM: 612.1
Samples: 6
Max nTPM: 1029.4
Min nTPM: 12.3
P10809_1018
1029.4
P10809_1037
755.2
P10809_1056
882.6
P10809_1075
14.8
P10809_1094
12.3
P10809_1106
978.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2341.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1728.5
Samples: 4
Max nTPM: 2231.5
Min nTPM: 1386.7
RHH5202_R3573
1684.9
RHH5230_R3602
1386.7
RHH5259_R3631
2231.5
RHH5288_R3660
1610.9
Effector memory CD8 T-cell nTPM: 2341.2
Samples: 4
Max nTPM: 3239.1
Min nTPM: 1523.6
RHH5203_R3574
2021.0
RHH5231_R3603
1523.6
RHH5260_R3632
3239.1
RHH5289_R3661
2581.1
MAIT T-cell nTPM: 2194.5
Samples: 4
Max nTPM: 3017.1
Min nTPM: 1436.3
RHH5233_R3605
1436.3
RHH5205_R3576
2404.3
RHH5262_R3634
3017.1
RHH5297_R3663
1920.1
Memory CD4 T-cell TFH nTPM: 1691.5
Samples: 4
Max nTPM: 2057.3
Min nTPM: 1531.6
RHH5300_R3666
1547.5
RHH5236_R3608
1531.6
RHH5265_R3637
2057.3
RHH5208_R3579
1629.5
Memory CD4 T-cell Th1 nTPM: 1826.4
Samples: 4
Max nTPM: 2630.4
Min nTPM: 1128.4
RHH5210_R3581
1802.4
RHH5302_R3668
1744.4
RHH5238_R3610
1128.4
RHH5267_R3639
2630.4
Memory CD4 T-cell Th1/Th17 nTPM: 2091.0
Samples: 4
Max nTPM: 2601.0
Min nTPM: 1380.6
RHH5303_R3669
2293.5
RHH5211_R3582
2088.9
RHH5239_R3611
1380.6
RHH5268_R3640
2601.0
Memory CD4 T-cell Th17 nTPM: 2032.8
Samples: 4
Max nTPM: 2337.2
Min nTPM: 1684.2
RHH5304_R3670
2076.8
RHH5212_R3583
2032.8
RHH5240_R3612
1684.2
RHH5269_R3641
2337.2
Memory CD4 T-cell Th2 nTPM: 1949.3
Samples: 4
Max nTPM: 2460.0
Min nTPM: 1266.5
RHH5305_R3671
1890.2
RHH5213_R3584
2180.3
RHH5241_R3613
1266.5
RHH5270_R3642
2460.0
Naive CD4 T-cell nTPM: 1968.3
Samples: 4
Max nTPM: 2563.6
Min nTPM: 1178.6
RHH5306_R3672
1945.6
RHH5214_R3585
2185.3
RHH5242_R3614
1178.6
RHH5271_R3643
2563.6
Naive CD8 T-cell nTPM: 1835.4
Samples: 4
Max nTPM: 2293.7
Min nTPM: 1547.5
RHH5201_R3572
1795.9
RHH5229_R3601
1547.5
RHH5258_R3630
2293.7
RHH5287_R3659
1704.5
Non-Vd2 gdTCR nTPM: 2303.4
Samples: 4
Max nTPM: 3269.9
Min nTPM: 1569.1
RHH5235_R3607
1569.1
RHH5264_R3636
3269.9
RHH5207_R3578
2392.9
RHH5299_R3665
1981.7
T-reg nTPM: 1834.1
Samples: 4
Max nTPM: 2321.1
Min nTPM: 1514.0
RHH5301_R3667
1514.0
RHH5237_R3609
1651.0
RHH5266_R3638
2321.1
RHH5209_R3580
1850.4
Terminal effector memory CD4 T-cell nTPM: 2249.0
Samples: 2
Max nTPM: 2975.2
Min nTPM: 1522.7
RHH5243_R3615
1522.7
RHH5272_R3644
2975.2
Terminal effector memory CD8 T-cell nTPM: 2259.9
Samples: 4
Max nTPM: 3303.2
Min nTPM: 1548.9
RHH5232_R3604
1548.9
RHH5204_R3575
2062.3
RHH5261_R3633
3303.2
RHH5296_R3662
2125.2
Vd2 gdTCR nTPM: 2280.6
Samples: 4
Max nTPM: 3324.2
Min nTPM: 1512.0
RHH5234_R3606
1512.0
RHH5206_R3577
2455.0
RHH5263_R3635
3324.2
RHH5298_R3664
1831.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.