We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL39
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL39
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2130.2 nTPM
HPA:1912.6 nTPM
GTEx:2130.2 nTPM
FANTOM5:79.5 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA047105
Glandular cells Low



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1912.6
overview
Female, age 68
Salivary gland sample 216
nTPM: 2334
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1580.8
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1823
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2130.2
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 2130.2
Samples: 181

Max nTPM: 7194.1
Min nTPM: 1133.3
Std nTPM: 642.6
Median nTPM: 1975.5
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 7194.1
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 5012.2
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 4246.4
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 3927.6
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 3850.1
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 3505.9
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 3285.3
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 3207.9
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 3070.4
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 3002.3
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 2946.8
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 2931.6
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 2853.6
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 2853.6
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 2805.1
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 2797.6
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 2769.9
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 2760.4
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 2710.3
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 2709.4
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 2700.3
GTEX-146FR-1226-SM-5MR78 60-69 years, female 2684.5
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 2661.0
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 2641.4
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 2606.3
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 2593.8
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 2578.3
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 2569.1
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 2568.4
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 2544.6
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 2515.0
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 2498.3
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 2494.3
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 2474.7
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 2451.0
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 2443.2
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 2415.1
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 2413.5
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 2384.9
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 2382.4
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 2350.2
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 2337.4
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 2331.7
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 2319.5
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 2313.2
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 2310.5
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 2276.7
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 2267.7
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 2263.8
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 2259.2
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 2246.0
GTEX-15SHV-2226-SM-6M464 60-69 years, male 2235.2
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 2232.2
GTEX-1445S-2926-SM-5O993 60-69 years, male 2225.2
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 2224.3
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 2220.9
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 2210.7
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 2209.8
GTEX-Y111-2626-SM-4TT24 50-59 years, male 2206.4
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 2197.0
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 2190.2
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 2188.9
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 2181.9
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 2159.8
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 2142.0
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 2108.9
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 2098.4
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 2095.4
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 2092.0
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 2083.6
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 2073.1
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 2066.4
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 2065.6
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 2054.9
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 2050.2
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 2040.0
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 2035.5
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 2017.1
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 2004.1
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 2002.4
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 2001.9
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 2000.0
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 1999.6
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 1995.4
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1994.2
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1993.5
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1990.3
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1985.3
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1983.5
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 1979.7
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1975.5
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 1971.0
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1957.7
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 1955.3
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1954.1
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 1932.2
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1927.9
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1926.9
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1924.7
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1919.5
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 1914.2
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1913.0
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 1905.9
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 1905.8
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1899.7
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 1897.3
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1897.2
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1895.2
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 1894.9
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1887.8
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1886.9
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1884.3
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1881.2
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 1879.5
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 1870.7
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1867.8
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 1866.9
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1860.7
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 1859.1
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 1858.7
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 1856.8
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 1848.4
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1847.3
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1844.3
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1839.8
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1839.5
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 1830.3
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 1825.4
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1824.8
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 1821.6
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1817.2
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1814.9
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 1812.2
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 1809.4
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 1800.4
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1797.6
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1795.0
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 1785.3
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 1782.6
GTEX-11P82-0926-SM-5986X 20-29 years, male 1781.6
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1776.3
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1770.6
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1767.5
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1765.6
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1759.2
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1753.5
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1749.4
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1737.0
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1727.2
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1715.1
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 1713.9
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 1700.7
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1697.1
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 1694.4
GTEX-13113-1526-SM-5EGHV 60-69 years, female 1693.5
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 1690.2
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1683.3
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1677.8
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1664.4
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 1664.0
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 1658.1
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1655.0
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1601.6
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1594.5
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1585.6
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1583.0
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1553.6
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 1546.1
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1530.7
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1519.6
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1514.2
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 1513.3
GTEX-1B932-0626-SM-731EM 40-49 years, female 1513.2
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 1502.7
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1492.3
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1461.7
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 1447.5
GTEX-178AV-1426-SM-6LLID 40-49 years, male 1444.5
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1418.9
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1386.8
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 1133.3
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

79.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 79.5
FF:10199-103F1 23 years, male 79.5
Salivary gland
Scaled Tags Per Million: 41.5
FF:10093-102C3 16-60 years, mixed 41.5
Submaxillary gland
Scaled Tags Per Million: 70.8
FF:10202-103F4 24 years, male 70.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo