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  • MT-ND3
TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
Tissue methods
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:5844.7 nTPM
GTEx:5844.7 nTPM
EYE - SINGLE CELL RNA EXPRESSION
Explore single cell type data

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5844.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 5844.7
Samples: 105

Max nTPM: 17875.9
Min nTPM: 1987.0
Std nTPM: 1915.8
Median nTPM:
120_1 70 years, female 17875.9
501_1 88 years, male 10911.3
315_1 62 years, female 9579.0
4_1 88 years, female 9166.6
466_1 57 years, female 9143.2
173_1 67 years, male 8367.4
414_1 84 years, female 8319.4
43_1 64 years, female 8226.6
137_1 83 years, male 7942.1
490_1 67 years, female 7920.0
99_1 64 years, male 7756.9
109_1 81 years, female 7712.1
468_1 89 years, male 7614.0
17_1 71 years, male 7594.9
518_1 75 years, female 7518.5
386_1 76 years, male 7459.7
413_1 59 years, female 7407.1
6_1 73 years, female 7192.2
350_1 84 years, female 7184.2
313_1 79 years, female 7061.9
415_1 77 years, female 7053.2
495_1 57 years, female 7025.8
265_1 87 years, male 7024.6
149_1 88 years, male 6955.5
499_1 55 years, female 6855.6
117_1 61 years, male 6847.3
317_1 60 years, male 6841.5
119_1 70 years, female 6748.8
142_1 61 years, female 6607.9
35_1 74 years, female 6534.5
32_1 67 years, male 6479.7
9_1 66 years, female 6464.8
324_1 76 years, male 6419.5
145_1 84 years, male 6382.8
375_1 74 years, female 6290.5
452_1 88 years, female 6264.6
394_1 75 years, female 6256.8
162_1 79 years, female 6256.5
254_1 77 years, female 6214.7
347_1 72 years, male 6213.3
322_1 76 years, male 6207.5
320_1 89 years, female 5933.8
425_1 59 years, female 5931.3
189_1 76 years, male 5885.6
42_1 85 years, male 5860.4
491_1 89 years, female 5764.4
41_1 94 years, female 5661.2
288_1 66 years, female 5653.3
349_1 83 years, male 5638.1
379_1 60 years, male 5590.2
314_1 67 years, male 5548.7
295_1 61 years, female 5537.6
335_1 73 years, female 5481.9
351_1 91 years, male 5375.8
2_1 77 years, female 5295.6
319_1 81 years, male 5268.4
177_1 74 years, male 5266.7
237_1 82 years, male 5210.1
307_1 66 years, female 5209.4
139_1 64 years, female 5194.8
264_1 73 years, female 5118.3
243_1 75 years, male 5071.7
218_1 71 years, female 5052.6
153_1 70 years, female 5018.2
353_1 82 years, female 5002.4
126_1 63 years, male 4987.5
354_1 81 years, female 4974.3
480_1 63 years, male 4964.5
18_1 88 years, male 4956.8
526_1 61 years, male 4938.3
316_1 62 years, male 4932.2
384_1 83 years, male 4932.2
308_1 70 years, female 4913.3
405_1 91 years, male 4910.8
293_1 68 years, female 4877.6
321_1 62 years, female 4846.9
229_1 69 years, female 4845.0
396_1 62 years, male 4806.6
503_1 68 years, male 4727.7
389_1 86 years, female 4719.5
115_1 83 years, male 4696.5
81_1 67 years, male 4652.5
318_1 68 years, male 4622.4
266_1 85 years, male 4442.2
376_1 75 years, female 4426.1
292_1 71 years, male 4376.8
251_1 78 years, male 4304.9
311_1 78 years, male 4279.5
517_1 88 years, male 4267.8
377_1 82 years, female 4249.1
89_1 63 years, male 4230.5
246_1 77 years, male 4201.8
404_1 82 years, female 4064.7
352_1 62 years, male 4047.8
291_1 76 years, male 4003.1
355_1 70 years, female 3903.6
217_1 76 years, male 3867.5
406_1 79 years, male 3814.2
506_1 65 years, male 3812.9
447_1 81 years, male 3808.3
172_1 72 years, female 3685.9
286_1 68 years, female 3513.5
348_1 84 years, male 3381.0
163_1 78 years, male 3247.3
356_1 87 years, female 1987.0
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