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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
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VALIDATION
Dictionary
Tissue proteome
Eye
Retina
Tissue methods
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:614.7 nTPM
GTEx:614.7 nTPM
FANTOM5:1155.1 Scaled Tags Per Million
EYE - SINGLE CELL RNA EXPRESSION
Explore single cell type data

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

614.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 614.7
Samples: 105

Max nTPM: 909.4
Min nTPM: 235.8
Std nTPM: 114.2
Median nTPM:
237_1 82 years, male 909.4
99_1 64 years, male 838.2
172_1 72 years, female 825.9
322_1 76 years, male 825.1
321_1 62 years, female 798.1
173_1 67 years, male 798.0
316_1 62 years, male 792.0
350_1 84 years, female 761.0
218_1 71 years, female 752.7
452_1 88 years, female 740.9
229_1 69 years, female 730.1
352_1 62 years, male 729.5
375_1 74 years, female 726.5
353_1 82 years, female 725.3
386_1 76 years, male 714.7
506_1 65 years, male 711.9
377_1 82 years, female 710.8
35_1 74 years, female 700.0
351_1 91 years, male 698.6
405_1 91 years, male 697.5
177_1 74 years, male 696.8
319_1 81 years, male 692.0
6_1 73 years, female 690.9
379_1 60 years, male 688.7
320_1 89 years, female 686.3
406_1 79 years, male 686.2
384_1 83 years, male 685.9
243_1 75 years, male 682.6
480_1 63 years, male 682.6
189_1 76 years, male 680.0
286_1 68 years, female 677.5
355_1 70 years, female 675.4
145_1 84 years, male 672.6
292_1 71 years, male 659.6
526_1 61 years, male 657.5
17_1 71 years, male 657.4
251_1 78 years, male 656.8
349_1 83 years, male 653.9
295_1 61 years, female 653.0
264_1 73 years, female 652.7
347_1 72 years, male 650.5
163_1 78 years, male 648.9
518_1 75 years, female 647.8
376_1 75 years, female 646.9
318_1 68 years, male 644.8
335_1 73 years, female 640.2
404_1 82 years, female 638.7
137_1 83 years, male 638.4
389_1 86 years, female 636.8
266_1 85 years, male 635.8
293_1 68 years, female 634.4
324_1 76 years, male 628.9
394_1 75 years, female 627.7
18_1 88 years, male 627.4
120_1 70 years, female 626.0
447_1 81 years, male 622.8
354_1 81 years, female 621.1
308_1 70 years, female 618.9
115_1 83 years, male 618.7
317_1 60 years, male 617.3
246_1 77 years, male 609.3
153_1 70 years, female 608.7
4_1 88 years, female 607.6
425_1 59 years, female 606.8
291_1 76 years, male 606.0
126_1 63 years, male 604.6
348_1 84 years, male 600.6
9_1 66 years, female 595.0
356_1 87 years, female 594.5
42_1 85 years, male 594.0
396_1 62 years, male 593.4
2_1 77 years, female 585.6
311_1 78 years, male 582.9
503_1 68 years, male 573.9
517_1 88 years, male 568.6
265_1 87 years, male 558.4
109_1 81 years, female 550.5
307_1 66 years, female 549.0
254_1 77 years, female 547.8
41_1 94 years, female 544.0
81_1 67 years, male 543.4
288_1 66 years, female 531.0
139_1 64 years, female 529.3
468_1 89 years, male 529.0
43_1 64 years, female 526.1
313_1 79 years, female 522.4
117_1 61 years, male 521.1
142_1 61 years, female 517.0
501_1 88 years, male 508.6
314_1 67 years, male 507.1
499_1 55 years, female 505.5
315_1 62 years, female 505.2
217_1 76 years, male 503.6
162_1 79 years, female 501.2
119_1 70 years, female 498.8
495_1 57 years, female 467.2
32_1 67 years, male 453.1
415_1 77 years, female 428.8
466_1 57 years, female 427.6
414_1 84 years, female 414.3
89_1 63 years, male 391.3
149_1 88 years, male 379.5
413_1 59 years, female 302.2
491_1 89 years, female 262.8
490_1 67 years, female 235.8
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1155.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 1155.1
FF:10030-101E3 24-65 years, mixed 1155.1

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