We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
DIPK1C
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • DIPK1C
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:20.9 nTPM
GTEx:36.3 nTPM
FANTOM5:5.4 Scaled Tags Per Million
Pig:7.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.9
Sample id Sample description nTPM
Putamen
nTPM: 20.9
2647 Male, age 75, left hemisphere 30.0
2482 Female, age 94, left hemisphere 27.8
2489 Female, age 72, unknown 26.3
1829 Male, age 74, unknown 20.8
2466 Female, age 79, unknown 15.9
1937 Female, age 91, right hemisphere 15.4
1838 Male, age 80, right hemisphere 10.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 36.3
Samples: 254

Max nTPM: 80.0
Min nTPM: 6.9
Std nTPM: 14.1
Median nTPM: 35.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 80.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 79.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 78.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 75.9
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 74.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 71.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 70.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 66.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 64.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 63.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 63.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 62.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 62.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 61.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 61.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 60.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 60.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 59.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 58.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 58.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 57.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 57.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 56.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 56.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 56.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 55.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 55.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 53.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 52.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 52.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 52.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 51.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 51.1
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 50.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 50.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 50.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 50.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 50.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 49.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 49.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 49.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 48.8
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 48.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 48.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 48.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 48.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 47.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 47.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 47.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 47.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 47.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 47.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 46.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 46.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 46.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 46.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 46.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 45.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 45.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 45.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 45.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 44.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 44.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 44.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 44.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 44.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 44.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 44.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 44.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 44.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 43.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 43.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 43.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 43.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 42.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 42.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 42.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 42.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 42.0
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 42.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 42.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 42.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 41.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 41.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 41.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 41.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 41.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 41.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 41.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 41.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 40.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 40.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 40.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 40.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 40.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 40.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 39.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 39.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 39.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 39.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 38.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 38.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 38.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 38.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 38.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 38.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 38.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 38.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 38.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 38.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 37.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 37.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 37.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 37.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 36.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 36.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 36.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 36.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 36.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 36.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 36.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 36.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 36.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 36.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 35.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 35.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 35.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 35.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 35.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 35.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 35.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 34.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 34.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 34.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 34.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 34.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 34.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 33.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 33.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 33.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 32.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 32.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 32.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 32.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 32.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 32.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 31.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 31.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 31.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 31.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 30.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 30.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 30.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 30.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 30.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 30.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 30.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 29.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 29.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 29.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 29.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 29.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 28.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 28.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 28.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 28.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 28.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 27.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 27.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 27.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 27.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 27.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 27.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 27.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 26.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 26.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 26.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 26.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 26.3
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 26.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 26.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 26.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 26.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 25.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 25.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 25.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 25.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 25.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 25.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 25.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 25.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 25.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 24.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 24.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 24.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 24.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 24.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 24.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 24.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 23.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 23.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 23.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 23.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 23.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 23.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 22.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 22.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 22.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 22.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 22.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 21.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 21.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 20.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 20.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 20.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 20.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 20.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 19.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 19.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 19.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 19.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 19.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 19.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 18.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 18.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 18.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 18.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 18.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 17.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 17.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 17.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 17.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 17.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 17.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 17.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 16.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 15.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 15.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 15.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 13.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 13.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 13.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 12.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 12.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 12.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 10.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 10.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 10.0
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 6.9
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 5.4
FF:10176-103C5 60 years, female 5.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.7
Pig sample Sample description nTPM
Putamen
nTPM: 7.8
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.9
Sample A Female 6.9
Sample B Female 9.5
Sample C Male 7.1
Sample D Male 7.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo