We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
276.0
nTPM
FANTOM5:
134.6
Scaled Tags Per Million
Pig:
53.6
nTPM
Allen mouse:
0.1
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
276.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 276.0
2188
Female, age 91, both hemispheres
359.6
2301
Female, age 85, both hemispheres
355.4
2090
Male, age 80, both hemispheres
264.7
1984
Male, age 76, both hemispheres
124.2
Dorsal cochlear nucleus nTPM: 200.2
2187
Female, age 91, both hemispheres
312.4
2802
Male, age 74, right hemisphere
198.7
2378
Male, age 80, both hemispheres
188.8
2058
Male, age 76, both hemispheres
155.3
2370
Male, age 61, both hemispheres
145.8
Dorsal tegmental nucleus nTPM: 184.2
2083
Male, age 80, both hemispheres
235.6
2326
Male, age 74, both hemispheres
214.4
1936
Male, age 76, left hemisphere
165.3
2358
Male, age 61, both hemispheres
121.6
Dorsolateral tegmental area nTPM: 204.8
2751
Female, age 85, both hemispheres
355.3
2654
Male, age 80, both hemispheres
238.9
2337
Male, age 61, both hemispheres
168.0
2360
Male, age 74, both hemispheres
142.2
2141
Male, age 76, both hemispheres
119.5
Kolliker-Fuse nucleus nTPM: 223.2
2793
Female, age 91, left hemisphere
337.3
2163
Male, age 80, both hemispheres
201.7
2315
Male, age 76, right hemisphere
130.5
Lateral lemniscal nuclei nTPM: 213.6
2320
Female, age 91, left hemisphere
291.5
2036
Male, age 80, both hemispheres
215.4
2746
Female, age 85, left hemisphere
208.1
2453
Male, age 74, right hemisphere
190.8
2169
Male, age 76, both hemispheres
161.9
Lateral parabrachial nucleus nTPM: 195.2
2792
Male, age 76, both hemispheres
310.6
2013
Male, age 80, both hemispheres
225.5
2139
Female, age 85, right hemisphere
128.9
2790
Male, age 61, both hemispheres
115.8
Lateral vestibular nucleus nTPM: 229.2
2311
Male, age 80, both hemispheres
264.1
2184
Male, age 76, both hemispheres
194.3
Locus coeruleus nTPM: 139.7
2162
Male, age 80, both hemispheres
158.9
2720
Male, age 74, both hemispheres
157.1
2014
Male, age 55, unknown
153.1
2317
Female, age 72, unknown
139.3
2123
Female, age 91, both hemispheres
131.3
1980
Male, age 76, both hemispheres
124.7
2788
Male, age 74, unknown
113.3
Medial parabrachial nucleus nTPM: 264.4
2170
Female, age 91, both hemispheres
416.1
2463
Female, age 85, right hemisphere
320.3
2854
Male, age 80, both hemispheres
244.1
2786
Male, age 76, both hemispheres
203.8
2156
Male, age 61, both hemispheres
137.6
Medial periolivary nuclei nTPM: 200.5
2081
Male, age 80, both hemispheres
274.7
2458
Female, age 91, both hemispheres
258.8
2791
Male, age 74, right hemisphere
188.1
2063
Male, age 76, both hemispheres
150.8
2171
Female, age 85, both hemispheres
130.1
Motor facial nucleus nTPM: 187.0
2126
Male, age 61, both hemispheres
250.0
2697
Female, age 85, both hemispheres
220.1
2365
Male, age 74, right hemisphere
199.7
2795
Female, age 91, both hemispheres
171.2
2327
Male, age 80, both hemispheres
153.5
2062
Male, age 76, both hemispheres
127.6
Motor trigeminal nucleus nTPM: 221.3
2321
Female, age 91, both hemispheres
307.1
2560
Male, age 74, both hemispheres
235.5
2079
Male, age 80, both hemispheres
210.1
2309
Male, age 76, both hemispheres
184.2
2335
Male, age 61, both hemispheres
169.8
Nuclei of the trapezoid body nTPM: 177.6
2166
Male, age 80, both hemispheres
249.7
2368
Female, age 91, both hemispheres
212.0
2159
Male, age 61, both hemispheres
190.7
1983
Male, age 76, both hemispheres
123.1
2735
Female, age 85, both hemispheres
112.4
Nucleus raphe magnus nTPM: 165.0
2459
Female, age 91, both hemispheres
256.4
2328
Male, age 80, both hemispheres
196.4
2051
Male, age 76, both hemispheres
167.5
2455
Male, age 74, both hemispheres
154.8
2160
Male, age 61, both hemispheres
113.8
2172
Female, age 85, both hemispheres
101.1
Paramedian reticular nucleus nTPM: 210.9
2052
Male, age 76, both hemispheres
233.0
2057
Male, age 80, both hemispheres
229.5
2050
Female, age 85, both hemispheres
213.4
2313
Male, age 61, both hemispheres
167.8
Pedunculopontine tegmental nucleus nTPM: 158.7
2334
Male, age 80, both hemispheres
197.1
1921
Female, age 85, both hemispheres
142.0
2338
Male, age 61, both hemispheres
136.9
Pontine nuclei nTPM: 229.5
2319
Female, age 91, both hemispheres
327.5
2454
Male, age 74, left hemisphere
300.6
2109
Female, age 72, unknown
276.2
2115
Male, age 80, left hemisphere
233.4
1863
Male, age 55, unknown
200.3
1968
Male, age 76, left hemisphere
189.8
2787
Female, age 85, both hemispheres
161.9
2727
Male, age 61, right hemisphere
146.6
Pontine raphe nucleus nTPM: 147.4
2122
Female, age 85, midline
165.3
2853
Male, age 76, midline
129.5
Posteroventral cochlear nucleus nTPM: 252.1
2135
Female, age 91, both hemispheres
416.2
2341
Male, age 80, both hemispheres
320.5
2070
Male, age 76, both hemispheres
200.9
2371
Male, age 61, both hemispheres
171.5
2752
Female, age 85, both hemispheres
151.2
Principal sensory trigeminal nucleus nTPM: 198.1
2367
Female, age 91, left hemisphere
294.1
2008
Male, age 80, left hemisphere
189.4
2324
Male, age 76, both hemispheres
170.3
2158
Male, age 61, both hemispheres
138.5
Reticular pontine nucleus, caudal nTPM: 236.1
2457
Female, age 91, both hemispheres
282.8
2559
Male, age 74, both hemispheres
276.4
2092
Male, age 76, both hemispheres
204.8
2332
Male, age 80, right hemisphere
180.6
Reticular pontine nucleus, oral nTPM: 248.7
2366
Female, age 91, both hemispheres
309.9
2361
Male, age 74, both hemispheres
261.3
2012
Female, age 85, both hemispheres
249.1
1939
Male, age 80, both hemispheres
233.7
2167
Male, age 76, both hemispheres
189.1
Reticulotegmental nucleus nTPM: 210.9
2322
Female, age 91, both hemispheres
257.6
2452
Male, age 74, both hemispheres
228.9
2333
Male, age 80, both hemispheres
209.0
2325
Male, age 76, both hemispheres
148.0
Spinal trigeminal nucleus, oral nTPM: 173.2
2164
Male, age 80, both hemispheres
224.0
1978
Male, age 76, both hemispheres
151.6
2737
Female, age 85, both hemispheres
144.1
Subcoeruleus area nTPM: 219.5
2369
Female, age 85, left hemisphere
384.9
2089
Male, age 76, left hemisphere
203.6
1958
Male, age 80, both hemispheres
199.2
2451
Male, age 74, both hemispheres
175.4
2323
Female, age 91, left hemisphere
134.3
Superior olive nTPM: 213.4
2020
Male, age 76, both hemispheres
239.2
2329
Male, age 80, right hemisphere
231.3
2561
Female, age 91, both hemispheres
227.8
2364
Male, age 74, right hemisphere
189.6
1875
Female, age 85, both hemispheres
179.3
Ventral periolivary nuclei nTPM: 186.6
2023
Male, age 76, both hemispheres
266.3
2794
Female, age 91, left hemisphere
186.1
2165
Male, age 80, both hemispheres
170.8
2130
Female, age 85, both hemispheres
123.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 200.3
2456
Female, age 91, both hemispheres
258.2
2840
Female, age 85, both hemispheres
207.2
1959
Male, age 76, both hemispheres
201.9
2161
Male, age 80, both hemispheres
194.2
2449
Male, age 74, both hemispheres
176.2
2359
Male, age 61, both hemispheres
164.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
53.6
Pig sample
Sample description
nTPM
Pons nTPM: 53.6
Samples: 4
Max nTPM: 70.5
Min nTPM: 38.8
Sample A
Female
38.8
Sample B
Female
49.2
Sample C
Male
55.9
Sample D
Male
70.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
