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  • SUMMARY

  • TISSUE

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  • SHTN1
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:100.2 nTPM
GTEx:33.6 nTPM
FANTOM5:201.8 Scaled Tags Per Million
Pig:82.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.2
Sample id Sample description nTPM
Putamen
nTPM: 100.2
2647 Male, age 75, left hemisphere 172.9
2489 Female, age 72, unknown 121.6
1829 Male, age 74, unknown 119.6
2482 Female, age 94, left hemisphere 94.0
1937 Female, age 91, right hemisphere 85.3
2466 Female, age 79, unknown 63.5
1838 Male, age 80, right hemisphere 44.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 33.6
Samples: 254

Max nTPM: 144.8
Min nTPM: 4.1
Std nTPM: 23.6
Median nTPM: 28.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 144.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 136.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 125.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 119.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 114.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 111.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 110.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 102.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 101.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 83.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 80.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 80.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 79.2
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 79.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 79.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 75.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 72.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 71.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 71.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 68.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 67.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 67.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 67.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 66.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 66.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 66.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 60.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 60.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 59.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 58.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 55.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 53.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 53.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 52.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 51.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 51.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 51.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 51.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 50.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 49.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 49.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 48.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 48.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 48.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 48.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 46.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 46.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 45.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 45.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 45.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 45.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 45.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 43.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 43.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 42.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 42.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 41.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 41.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 41.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 41.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 41.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 41.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 41.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 41.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 41.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 41.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 41.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 40.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 40.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 39.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 39.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 39.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 39.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 39.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 38.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 38.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 38.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 38.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 38.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 38.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 38.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 37.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 37.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 37.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 36.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 36.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 36.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 36.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 35.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 35.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 35.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 34.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 34.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 34.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 34.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 34.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 33.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 32.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 32.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 32.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 32.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 32.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 32.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 32.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 32.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 32.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 32.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 32.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 31.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 31.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 31.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 31.2
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 31.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 30.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 30.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 30.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 30.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 30.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 30.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 29.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 29.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 29.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 29.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 29.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 28.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 28.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 28.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 28.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 28.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 28.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 28.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 27.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 27.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 27.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 27.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 27.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 26.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 26.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 26.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 26.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 26.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 26.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 26.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 25.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 25.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 25.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 25.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 25.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 25.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 25.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 25.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 25.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 24.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 24.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 24.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 24.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 24.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 23.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 23.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 23.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 22.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 22.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 22.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 22.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 22.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 21.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 21.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 21.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 21.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 21.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 21.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 21.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 21.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 20.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 20.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 20.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 20.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 20.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 19.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 19.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 19.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 19.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 19.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 18.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 18.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 18.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 18.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 18.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 18.1
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 17.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 17.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 17.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 17.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 17.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 16.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 16.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 16.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 16.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 16.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 15.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 15.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 15.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 15.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 15.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 15.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 15.0
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 14.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 14.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 14.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 14.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 14.2
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 14.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 13.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 13.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 13.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 13.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 13.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 13.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 13.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 13.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 12.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 12.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 12.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 11.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 11.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 11.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 11.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 11.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 10.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 9.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 9.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 9.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 9.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 9.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 9.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 8.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 8.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 8.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 8.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 7.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 7.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 7.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 7.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 7.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 6.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 6.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 6.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 5.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 4.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 4.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 4.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

201.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 201.8
FF:10176-103C5 60 years, female 201.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.2
Pig sample Sample description nTPM
Putamen
nTPM: 82.2
Samples: 4

Max nTPM: 114.2
Min nTPM: 61.5
Sample A Female 114.2
Sample B Female 63.5
Sample C Male 61.5
Sample D Male 89.7

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