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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
80.9
nTPM
GTEx:
80.9
nTPM
FANTOM5:
8.9
Scaled Tags Per Million
Pig:
0.5
nTPM
Mouse:
11.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
80.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 80.9
Samples: 105
Max nTPM: 183.0
Min nTPM: 24.4
Std nTPM: 24.1
Median nTPM:
501_1
88 years, male
183.0
414_1
84 years, female
128.9
142_1
61 years, female
123.9
413_1
59 years, female
121.6
137_1
83 years, male
120.7
491_1
89 years, female
116.4
506_1
65 years, male
115.5
313_1
79 years, female
115.2
42_1
85 years, male
114.6
375_1
74 years, female
114.3
162_1
79 years, female
113.7
149_1
88 years, male
110.6
264_1
73 years, female
108.4
4_1
88 years, female
106.9
396_1
62 years, male
104.9
394_1
75 years, female
103.8
518_1
75 years, female
103.8
452_1
88 years, female
102.9
237_1
82 years, male
102.8
109_1
81 years, female
100.5
217_1
76 years, male
100.0
490_1
67 years, female
99.9
295_1
61 years, female
99.8
379_1
60 years, male
99.8
415_1
77 years, female
99.8
99_1
64 years, male
97.6
389_1
86 years, female
95.5
177_1
74 years, male
94.3
292_1
71 years, male
94.3
288_1
66 years, female
92.5
314_1
67 years, male
91.7
266_1
85 years, male
91.3
349_1
83 years, male
91.2
32_1
67 years, male
91.0
315_1
62 years, female
90.0
9_1
66 years, female
89.7
17_1
71 years, male
89.3
126_1
63 years, male
89.3
81_1
67 years, male
89.2
254_1
77 years, female
88.4
405_1
91 years, male
87.9
35_1
74 years, female
87.0
173_1
67 years, male
87.0
324_1
76 years, male
87.0
376_1
75 years, female
85.6
119_1
70 years, female
84.4
351_1
91 years, male
84.3
229_1
69 years, female
84.0
286_1
68 years, female
84.0
18_1
88 years, male
83.6
377_1
82 years, female
81.8
189_1
76 years, male
81.4
115_1
83 years, male
80.9
503_1
68 years, male
80.7
265_1
87 years, male
80.5
466_1
57 years, female
79.8
354_1
81 years, female
77.8
384_1
83 years, male
76.6
404_1
82 years, female
75.4
347_1
72 years, male
75.3
43_1
64 years, female
74.2
145_1
84 years, male
72.6
499_1
55 years, female
71.9
447_1
81 years, male
71.8
41_1
94 years, female
70.7
243_1
75 years, male
70.6
117_1
61 years, male
70.3
406_1
79 years, male
70.1
120_1
70 years, female
70.0
348_1
84 years, male
67.3
318_1
68 years, male
67.2
468_1
89 years, male
66.9
355_1
70 years, female
66.6
356_1
87 years, female
66.6
251_1
78 years, male
66.4
246_1
77 years, male
66.0
172_1
72 years, female
65.9
517_1
88 years, male
65.2
291_1
76 years, male
65.0
319_1
81 years, male
64.7
89_1
63 years, male
64.5
311_1
78 years, male
63.5
480_1
63 years, male
62.4
386_1
76 years, male
61.9
352_1
62 years, male
61.8
163_1
78 years, male
59.8
153_1
70 years, female
59.6
322_1
76 years, male
58.8
139_1
64 years, female
57.7
335_1
73 years, female
57.2
316_1
62 years, male
56.5
350_1
84 years, female
55.5
353_1
82 years, female
55.4
526_1
61 years, male
55.1
320_1
89 years, female
52.3
6_1
73 years, female
51.7
425_1
59 years, female
51.6
317_1
60 years, male
45.5
218_1
71 years, female
43.5
293_1
68 years, female
41.0
308_1
70 years, female
40.9
321_1
62 years, female
40.3
495_1
57 years, female
38.7
307_1
66 years, female
34.0
2_1
77 years, female
24.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
