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TISSUE PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:6.3 nTPM
GTEx:7.5 nTPM
FANTOM5:16.5 Scaled Tags Per Million
Pig:8.9 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.3
Sample id Sample description nTPM
Putamen
nTPM: 6.3
2466 Female, age 79, unknown 7.5
2489 Female, age 72, unknown 6.5
2647 Male, age 75, left hemisphere 6.5
1829 Male, age 74, unknown 6.4
1838 Male, age 80, right hemisphere 6.1
1937 Female, age 91, right hemisphere 5.7
2482 Female, age 94, left hemisphere 5.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 7.5
Samples: 254

Max nTPM: 14.8
Min nTPM: 2.7
Std nTPM: 2.2
Median nTPM: 7.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 14.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 14.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 13.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 13.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 12.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 12.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 12.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 12.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 12.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 11.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 11.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 11.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 11.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 11.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 11.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 11.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 11.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 10.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 10.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 10.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 10.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 10.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 10.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 10.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 10.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 10.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 10.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 10.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 10.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 10.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 10.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 10.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 10.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 10.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 9.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 9.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 9.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 9.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 9.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 9.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 9.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 9.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 9.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 9.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 9.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 9.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 9.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 9.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 9.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 9.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 9.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 9.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 9.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 9.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 9.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 9.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 9.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 9.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 8.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 8.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 8.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 8.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 8.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 8.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 8.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 8.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 8.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 8.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 8.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 8.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 8.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 8.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 8.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 8.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 8.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 8.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 8.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 8.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 8.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 8.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 8.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 8.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 8.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 8.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 8.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 8.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 8.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 8.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 8.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 8.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 8.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 7.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 7.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 7.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 7.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 7.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 7.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 7.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 7.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 7.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 7.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 7.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 7.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 7.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 7.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 7.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 7.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 7.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 7.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 7.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 7.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 7.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 7.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 7.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 7.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 7.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 7.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 7.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 7.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 7.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 7.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 7.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 7.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 7.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 7.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 7.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 7.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 7.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 7.2
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 7.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 7.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 7.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 7.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 7.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 7.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 7.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 7.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 7.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 6.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 6.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 6.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 6.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 6.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 6.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 6.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 6.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 6.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 6.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 6.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 6.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 6.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 6.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 6.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 6.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 6.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 6.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 6.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 6.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 6.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 6.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 6.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 6.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 6.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 6.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 6.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 6.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 6.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 6.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 6.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 6.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 6.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 6.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 6.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 6.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 6.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 6.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 6.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 6.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 6.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 6.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 6.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 6.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 6.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 6.0
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 6.0
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 6.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 5.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 5.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 5.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 5.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 5.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 5.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 5.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 5.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 5.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.5
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 5.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 5.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 5.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 5.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 5.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 5.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 5.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 5.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 5.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 5.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 5.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 5.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 5.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 5.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 5.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 4.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 4.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 4.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 4.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 4.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 4.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 4.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 4.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 4.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 4.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 4.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 4.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 4.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 4.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 4.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 4.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 4.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 4.3
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 4.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 4.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 4.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 4.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 3.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 3.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 3.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 3.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 3.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 3.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 3.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 2.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 2.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

16.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 16.5
FF:10176-103C5 60 years, female 16.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.9
Pig sample Sample description nTPM
Putamen
nTPM: 8.9
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.4
Sample A Female 8.2
Sample B Female 7.4
Sample C Male 10.8
Sample D Male 9.3

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