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  • TISSUE

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  • CBX6
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:161.0 nTPM
GTEx:34.8 nTPM
FANTOM5:236.0 Scaled Tags Per Million
Pig:212.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.0
Sample id Sample description nTPM
Putamen
nTPM: 161.0
2647 Male, age 75, left hemisphere 212.2
2466 Female, age 79, unknown 169.1
2489 Female, age 72, unknown 166.2
1829 Male, age 74, unknown 164.9
1838 Male, age 80, right hemisphere 152.3
1937 Female, age 91, right hemisphere 149.8
2482 Female, age 94, left hemisphere 112.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 34.8
Samples: 254

Max nTPM: 62.8
Min nTPM: 15.1
Std nTPM: 9.3
Median nTPM: 34.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 62.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 61.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 59.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 58.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 54.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 53.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 51.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 51.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 50.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 50.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 50.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 49.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 49.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 49.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 48.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 48.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 48.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 48.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 48.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 48.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 48.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 47.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 46.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 46.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 46.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 46.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 46.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 46.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 46.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 46.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 45.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 45.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 45.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 45.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 45.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 45.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 45.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 44.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 44.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 44.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 44.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 44.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 44.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 44.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 44.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 44.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 43.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 43.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 43.0
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 43.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 42.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 42.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 42.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 42.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 42.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 42.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 41.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 41.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 41.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 41.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 41.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 41.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 41.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 41.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 41.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 41.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 41.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 41.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 41.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 40.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 40.9
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 40.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 40.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 40.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 40.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 40.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 40.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 40.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 40.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 40.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 40.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 39.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 39.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 39.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 39.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 39.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 39.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 39.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 38.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 38.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 38.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 38.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 38.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 38.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 38.2
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 38.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 38.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 38.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 37.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 37.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 37.7
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 37.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 37.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 37.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 37.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 37.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 37.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 37.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 37.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 37.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 36.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 36.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 36.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 36.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 36.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 36.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 36.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 36.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 35.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 35.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 35.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 35.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 35.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 35.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 35.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 34.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 34.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 34.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 34.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 34.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 34.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 34.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 34.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 34.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 34.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 33.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 33.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 33.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 33.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 33.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 33.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 33.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 33.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 33.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 32.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 32.9
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 32.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 32.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 32.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 32.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 32.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 32.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 31.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 31.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 31.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 31.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 31.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 31.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 31.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 31.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 30.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 30.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 30.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 30.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 29.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 29.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 29.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 29.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 29.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 29.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 29.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 29.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 29.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 29.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 29.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 28.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 28.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 28.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 28.9
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 28.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 28.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 28.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 28.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 28.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 28.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 28.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 28.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 27.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 27.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 27.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 27.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 27.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 27.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 27.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 27.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 27.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 27.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 26.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 26.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 26.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 26.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 26.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 26.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 26.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 26.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 26.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 25.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 25.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 25.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 25.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 25.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 24.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 24.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 24.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 24.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 24.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 24.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 23.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 23.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 23.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 23.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 23.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 23.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 23.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 22.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 22.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 22.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 21.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 21.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 21.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 21.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 21.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 21.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 21.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 20.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 20.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 20.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 19.9
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 19.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 19.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 19.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 19.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 19.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 19.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 18.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 18.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 18.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 18.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 17.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 17.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 15.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 15.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

236.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 236.0
FF:10176-103C5 60 years, female 236.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

212.8
Pig sample Sample description nTPM
Putamen
nTPM: 212.8
Samples: 4

Max nTPM: 255.8
Min nTPM: 152.5
Sample A Female 152.5
Sample B Female 203.0
Sample C Male 239.7
Sample D Male 255.8

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