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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
156.0
nTPM
GTEx:
156.0
nTPM
FANTOM5:
124.8
Scaled Tags Per Million
Pig:
61.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
156.0
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 156.0
Samples: 105
Max nTPM: 278.6
Min nTPM: 86.0
Std nTPM: 34.0
Median nTPM:
308_1
70 years, female
278.6
495_1
57 years, female
277.6
413_1
59 years, female
252.3
501_1
88 years, male
223.6
384_1
83 years, male
222.7
139_1
64 years, female
211.8
89_1
63 years, male
211.6
307_1
66 years, female
206.8
466_1
57 years, female
206.7
491_1
89 years, female
200.1
2_1
77 years, female
199.1
246_1
77 years, male
193.0
311_1
78 years, male
190.8
414_1
84 years, female
190.5
490_1
67 years, female
186.8
377_1
82 years, female
186.1
149_1
88 years, male
185.7
315_1
62 years, female
184.3
265_1
87 years, male
184.0
415_1
77 years, female
182.9
145_1
84 years, male
182.2
254_1
77 years, female
181.4
126_1
63 years, male
180.6
162_1
79 years, female
179.7
314_1
67 years, male
176.3
35_1
74 years, female
174.9
43_1
64 years, female
174.3
322_1
76 years, male
173.3
17_1
71 years, male
172.6
41_1
94 years, female
170.8
518_1
75 years, female
169.9
137_1
83 years, male
169.2
526_1
61 years, male
167.7
266_1
85 years, male
163.9
229_1
69 years, female
163.3
499_1
55 years, female
162.9
4_1
88 years, female
162.3
251_1
78 years, male
162.2
189_1
76 years, male
161.2
348_1
84 years, male
160.8
376_1
75 years, female
159.4
404_1
82 years, female
159.3
321_1
62 years, female
157.8
468_1
89 years, male
157.5
81_1
67 years, male
156.3
18_1
88 years, male
155.5
295_1
61 years, female
154.6
396_1
62 years, male
153.2
288_1
66 years, female
152.3
217_1
76 years, male
151.7
120_1
70 years, female
151.2
316_1
62 years, male
150.8
291_1
76 years, male
150.7
324_1
76 years, male
149.7
480_1
63 years, male
149.0
389_1
86 years, female
148.2
452_1
88 years, female
147.2
153_1
70 years, female
145.2
173_1
67 years, male
145.0
293_1
68 years, female
145.0
503_1
68 years, male
144.3
119_1
70 years, female
143.4
379_1
60 years, male
141.9
237_1
82 years, male
141.8
394_1
75 years, female
141.7
425_1
59 years, female
141.6
109_1
81 years, female
140.6
292_1
71 years, male
140.2
286_1
68 years, female
140.1
313_1
79 years, female
140.0
386_1
76 years, male
139.9
375_1
74 years, female
139.4
406_1
79 years, male
139.3
117_1
61 years, male
138.6
517_1
88 years, male
138.6
9_1
66 years, female
138.3
32_1
67 years, male
136.8
264_1
73 years, female
135.3
218_1
71 years, female
135.1
42_1
85 years, male
134.6
115_1
83 years, male
134.4
447_1
81 years, male
134.3
320_1
89 years, female
133.8
405_1
91 years, male
132.6
142_1
61 years, female
128.5
317_1
60 years, male
128.1
319_1
81 years, male
128.1
177_1
74 years, male
127.6
335_1
73 years, female
126.9
353_1
82 years, female
123.9
351_1
91 years, male
122.1
6_1
73 years, female
119.5
347_1
72 years, male
119.5
355_1
70 years, female
119.5
349_1
83 years, male
116.8
506_1
65 years, male
116.2
163_1
78 years, male
114.6
243_1
75 years, male
112.6
350_1
84 years, female
111.5
172_1
72 years, female
111.4
354_1
81 years, female
109.0
356_1
87 years, female
106.6
318_1
68 years, male
104.6
352_1
62 years, male
101.3
99_1
64 years, male
86.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.