HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:137.7 nTPM
HPA Brain:67.9 nTPM
GTEx:137.7 nTPM
FANTOM5:259.4 Scaled Tags Per Million
Pig:80.4 nTPM
Mouse:76.3 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045209
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 67.9
Sample id Sample description nTPM
Hippocampus
nTPM: 67.9
1898 Male, age 80, left hemisphere 76.1
2529 Female, age 94, left hemisphere 75.2
1911 Female, age 85, right hemisphere 69.0
1855 Male, age 76, left hemisphere 68.4
2621 Female, age 67, right hemisphere 62.3
2148 Female, age 91, left hemisphere 56.6
Dentate gyrus
nTPM: 65.4
2530 Female, age 94, left hemisphere 85.3
2010 Male, age 76, both hemispheres 72.9
2528 Male, age 74, both hemispheres 69.3
1927 Female, age 91, both hemispheres 57.3
2531 Female, age 67, both hemispheres 54.4
2246 Female, age 85, both hemispheres 53.0
Entorhinal gyrus
nTPM: 57.4
2117 Female, age 91, right hemisphere 74.9
1938 Female, age 85, left hemisphere 61.0
1787 Male, age 76, left hemisphere 58.8
2764 Male, age 80, right hemisphere 55.4
2613 Female, age 94, left hemisphere 49.5
2686 Male, age 75, right hemisphere 44.4
Hippocampus, CA1
nTPM: 64.9
2749 Male, age 80, left hemisphere 71.3
1873 Female, age 85, both hemispheres 66.2
2045 Male, age 76, both hemispheres 63.2
2527 Male, age 74, both hemispheres 62.2
2082 Female, age 91, right hemisphere 61.7
Hippocampus, CA2
nTPM: 66.5
2249 Male, age 74, both hemispheres 77.8
1963 Male, age 80, left hemisphere 69.7
1892 Male, age 76, both hemispheres 66.5
2437 Female, age 94, left hemisphere 65.6
2113 Female, age 91, right hemisphere 60.4
1940 Female, age 85, left hemisphere 59.0
Hippocampus, CA3
nTPM: 62.8
2436 Male, age 74, both hemispheres 94.7
1867 Male, age 76, both hemispheres 63.0
1891 Female, age 85, both hemispheres 61.3
2137 Male, age 80, left hemisphere 56.5
2620 Female, age 94, left hemisphere 56.0
2861 Female, age 67, both hemispheres 45.1
Parahippocampal cortex
nTPM: 51.0
2018 Male, age 76, both hemispheres 61.3
2245 Female, age 91, both hemispheres 60.3
1933 Female, age 85, both hemispheres 56.7
2250 Female, age 67, right hemisphere 56.5
1990 Female, age 91, right hemisphere 54.7
1850 Male, age 80, both hemispheres 52.0
2532 Female, age 72, left hemisphere 49.4
2692 Male, age 74, both hemispheres 44.6
2622 Female, age 67, right hemisphere 39.6
2693 Female, age 94, both hemispheres 34.6
Perirhinal gyrus
nTPM: 55.7
1847 Female, age 91, left hemisphere 64.2
1794 Male, age 80, right hemisphere 60.1
1841 Female, age 85, right hemisphere 57.2
2521 Female, age 94, right hemisphere 51.5
2848 Male, age 76, right hemisphere 45.6
Subiculum
nTPM: 56.7
2042 Male, age 76, both hemispheres 63.9
1977 Female, age 85, both hemispheres 58.8
2729 Female, age 91, right hemisphere 58.3
1901 Male, age 80, both hemispheres 58.1
2619 Male, age 74, both hemispheres 57.9
2438 Female, age 94, left hemisphere 43.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 137.7
GTEx sample id Sample description nTPM
118.3134.3152.470.2198.7020406080100120140160180200220240260
Brain - Hippocampus
Average nTPM: 137.7
Samples: 197

Max nTPM: 269.6
Min nTPM: 70.2
Std nTPM: 29.2
Median nTPM: 134.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 269.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 245.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 224.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 204.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 198.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 196.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 195.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 193.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 190.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 188.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 183.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 259.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 259.4
FF:10169-103B7 60 years, female 405.0
FF:10153-102I9 76 years, female 113.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 80.4
Pig sample Sample description nTPM
56.660.368.653.386.101020304050607080
 		Subiculum
nTPM: 65.0
Samples: 4

Max nTPM: 86.1
Min nTPM: 53.3
Sample A Female 86.1
Sample B Female 62.8
Sample C Male 53.3
Sample D Male 57.7
68.680.091.848.4112.90102030405060708090100110
 		Dorsal hippocampus
nTPM: 80.4
Samples: 4

Max nTPM: 112.9
Min nTPM: 48.4
Sample A Female 112.9
Sample B Female 75.3
Sample C Male 84.8
Sample D Male 48.4
56.370.580.644.081.001020304050607080
 		Entorhinal cortex
nTPM: 66.5
Samples: 4

Max nTPM: 81.0
Min nTPM: 44.0
Sample A Female 60.4
Sample B Female 80.5
Sample C Male 81.0
Sample D Male 44.0
70.876.680.859.787.001020304050607080
 		Ventral hippocampus
nTPM: 75.0
Samples: 4

Max nTPM: 87.0
Min nTPM: 59.7
Sample A Female 78.7
Sample B Female 59.7
Sample C Male 87.0
Sample D Male 74.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 76.3
Mouse sample Sample description nTPM
68.569.871.865.270.0010203040506070
 		Entorhinal cortex
nTPM: 70.5
Samples: 4

Max nTPM: 77.0
Min nTPM: 65.2
Sample A Male 65.2
Sample B Male 69.6
Sample C Female 77.0
Sample D Female 70.0
72.174.278.468.875.201020304050607080
 		Hippocampal formation
nTPM: 76.3
Samples: 4

Max nTPM: 88.0
Min nTPM: 68.8
Sample A Male 88.0
Sample B Male 68.8
Sample C Female 73.2
Sample D Female 75.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
69885768 Antisense, RP_050512_03_D07, Mouse strain C57BL/6J (56 days, male) 4.6

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