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  • TISSUE

  • BRAIN

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TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:36.2 nTPM
GTEx:38.3 nTPM
FANTOM5:49.0 Scaled Tags Per Million
Pig:24.4 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.2
Sample id Sample description nTPM
Putamen
nTPM: 36.2
2647 Male, age 75, left hemisphere 39.5
1937 Female, age 91, right hemisphere 39.2
1838 Male, age 80, right hemisphere 37.8
2466 Female, age 79, unknown 36.2
2482 Female, age 94, left hemisphere 35.2
1829 Male, age 74, unknown 34.7
2489 Female, age 72, unknown 30.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 38.3
Samples: 254

Max nTPM: 63.3
Min nTPM: 22.7
Std nTPM: 6.7
Median nTPM: 38.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 63.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 60.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 56.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 54.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 53.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 53.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 52.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 51.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 50.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 50.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 50.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 49.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 49.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 49.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 49.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 48.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 48.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 48.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 47.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 47.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 47.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 47.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 46.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 46.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 46.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 46.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 46.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 46.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 46.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 46.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 45.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 45.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 45.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 45.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 45.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 45.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 45.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 44.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 44.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 44.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 44.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 44.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 44.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 44.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 44.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 44.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 44.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 44.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 44.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 44.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 43.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 43.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 43.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 43.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 43.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 43.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 42.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 42.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 42.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 42.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 42.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 42.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 42.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 42.2
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 42.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 42.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 42.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 42.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 41.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 41.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 41.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 41.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 41.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 41.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 41.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 41.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 41.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 41.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 41.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 41.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 41.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 41.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 41.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 41.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 40.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 40.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 40.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 40.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 40.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 40.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 40.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 40.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 40.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 40.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 40.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 40.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 40.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 40.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 40.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 40.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 39.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 39.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 39.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 39.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 39.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 39.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 39.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 39.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 39.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 39.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 39.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 39.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 39.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 39.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 39.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 39.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 39.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 38.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 38.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 38.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 38.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 38.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 38.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 38.4
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 38.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 38.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 38.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 38.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 38.0
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 38.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 37.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 37.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 37.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 37.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 37.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 37.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 37.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 37.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 37.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 37.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 37.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 37.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 37.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 37.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 36.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 36.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 36.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 36.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 36.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 36.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 36.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 36.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 36.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 36.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 36.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 36.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 36.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 36.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 36.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 35.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 35.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 35.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 35.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 35.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 35.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 35.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 35.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 35.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 35.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 35.2
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 35.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 35.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 34.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 34.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 34.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 34.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 34.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 34.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 34.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 34.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 34.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 34.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 34.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 34.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 34.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 34.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 34.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 33.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 33.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 33.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 33.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 33.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 33.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 33.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 33.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 33.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 33.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 33.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 33.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 32.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 32.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 32.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 32.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 32.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 32.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 32.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 32.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 32.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 32.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 32.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 32.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 31.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 31.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 31.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 31.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 31.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 31.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 31.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 31.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 31.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 30.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 30.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 30.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 30.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 30.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 30.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 30.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 30.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 30.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 29.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 29.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 29.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 28.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 28.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 28.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 28.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 28.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 27.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 27.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 27.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 27.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 27.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 27.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 26.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 26.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 24.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 24.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 23.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 23.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 22.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 22.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

49.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 49.0
FF:10176-103C5 60 years, female 49.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.4
Pig sample Sample description nTPM
Putamen
nTPM: 24.4
Samples: 4

Max nTPM: 33.3
Min nTPM: 16.4
Sample A Female 16.4
Sample B Female 22.2
Sample C Male 33.3
Sample D Male 25.7

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