HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:216.1 nTPM
HPA Brain:400.2 nTPM
GTEx:216.1 nTPM
FANTOM5:1008.7 Scaled Tags Per Million
Pig:446.2 nTPM
Mouse:310.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045218Antibody HPA050333
Glial cells HighHigh
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 400.2
Sample id Sample description nTPM
Hippocampus
nTPM: 303.8
1898 Male, age 80, left hemisphere 375.6
2621 Female, age 67, right hemisphere 367.2
2148 Female, age 91, left hemisphere 304.7
1855 Male, age 76, left hemisphere 273.1
2529 Female, age 94, left hemisphere 259.2
1911 Female, age 85, right hemisphere 243.1
Dentate gyrus
nTPM: 345.8
2530 Female, age 94, left hemisphere 450.4
2531 Female, age 67, both hemispheres 418.1
1927 Female, age 91, both hemispheres 387.0
2246 Female, age 85, both hemispheres 317.1
2010 Male, age 76, both hemispheres 269.1
2528 Male, age 74, both hemispheres 232.9
Entorhinal gyrus
nTPM: 379.0
2613 Female, age 94, left hemisphere 595.8
1938 Female, age 85, left hemisphere 471.2
2764 Male, age 80, right hemisphere 396.5
2686 Male, age 75, right hemisphere 324.0
1787 Male, age 76, left hemisphere 300.9
2117 Female, age 91, right hemisphere 185.3
Hippocampus, CA1
nTPM: 342.4
2749 Male, age 80, left hemisphere 543.3
1873 Female, age 85, both hemispheres 358.8
2527 Male, age 74, both hemispheres 356.6
2045 Male, age 76, both hemispheres 277.8
2082 Female, age 91, right hemisphere 175.4
Hippocampus, CA2
nTPM: 287.4
2437 Female, age 94, left hemisphere 357.4
1892 Male, age 76, both hemispheres 334.8
1963 Male, age 80, left hemisphere 312.0
1940 Female, age 85, left hemisphere 286.6
2249 Male, age 74, both hemispheres 244.2
2113 Female, age 91, right hemisphere 189.4
Hippocampus, CA3
nTPM: 335.4
2620 Female, age 94, left hemisphere 470.6
2861 Female, age 67, both hemispheres 420.0
2137 Male, age 80, left hemisphere 368.8
1867 Male, age 76, both hemispheres 272.9
1891 Female, age 85, both hemispheres 242.6
2436 Male, age 74, both hemispheres 237.8
Parahippocampal cortex
nTPM: 361.1
2245 Female, age 91, both hemispheres 543.9
1990 Female, age 91, right hemisphere 416.3
1850 Male, age 80, both hemispheres 381.3
2622 Female, age 67, right hemisphere 373.4
2532 Female, age 72, left hemisphere 371.5
2250 Female, age 67, right hemisphere 366.8
1933 Female, age 85, both hemispheres 362.0
2693 Female, age 94, both hemispheres 308.0
2692 Male, age 74, both hemispheres 280.5
2018 Male, age 76, both hemispheres 207.3
Perirhinal gyrus
nTPM: 400.2
1847 Female, age 91, left hemisphere 513.6
1841 Female, age 85, right hemisphere 405.9
2521 Female, age 94, right hemisphere 402.8
1794 Male, age 80, right hemisphere 391.9
2848 Male, age 76, right hemisphere 286.7
Subiculum
nTPM: 275.4
2438 Female, age 94, left hemisphere 388.4
1977 Female, age 85, both hemispheres 368.4
1901 Male, age 80, both hemispheres 292.7
2619 Male, age 74, both hemispheres 239.9
2042 Male, age 76, both hemispheres 183.4
2729 Female, age 91, right hemisphere 179.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 216.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 216.1
Samples: 255

Max nTPM: 579.7
Min nTPM: 17.3
Std nTPM: 125.2
Median nTPM: 221.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 579.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 550.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 540.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 514.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 509.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 496.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 494.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 493.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 478.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 472.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 452.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1008.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1008.7
FF:10169-103B7 60 years, female 1286.8
FF:10153-102I9 76 years, female 730.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 446.2
Pig sample Sample description nTPM
Subiculum
nTPM: 413.2
Samples: 4

Max nTPM: 518.7
Min nTPM: 372.7
Sample A Female 518.7
Sample B Female 372.7
Sample C Male 379.9
Sample D Male 381.5
Dorsal hippocampus
nTPM: 420.3
Samples: 4

Max nTPM: 553.5
Min nTPM: 316.2
Sample A Female 553.5
Sample B Female 451.6
Sample C Male 359.8
Sample D Male 316.2
Entorhinal cortex
nTPM: 384.4
Samples: 4

Max nTPM: 408.6
Min nTPM: 336.5
Sample A Female 408.6
Sample B Female 336.5
Sample C Male 398.5
Sample D Male 393.8
Ventral hippocampus
nTPM: 446.2
Samples: 4

Max nTPM: 536.3
Min nTPM: 284.9
Sample A Female 536.3
Sample B Female 284.9
Sample C Male 496.7
Sample D Male 466.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 310.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 310.4
Samples: 4

Max nTPM: 334.3
Min nTPM: 288.3
Sample A Male 288.3
Sample B Male 334.3
Sample C Female 302.0
Sample D Female 316.8
Hippocampal formation
nTPM: 282.0
Samples: 4

Max nTPM: 320.3
Min nTPM: 255.3
Sample A Male 320.3
Sample B Male 282.2
Sample C Female 270.2
Sample D Female 255.3

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