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TISSUE KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Kidney
Tissue proteome
Kidney
Tissue methods
KIDNEY - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:299.3 nTPM
HPA:90.5 nTPM
GTEx:299.3 nTPM
FANTOM5:209.3 Scaled Tags Per Million
KIDNEY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

KIDNEY - Annotated protein expression
Pending normal tissue analysis

KIDNEY - TISSUE (MS)i

The MS-based protein data details section shows detailed information about the individual samples used for the relative protein abundance measurements.

Intensity values provides a relative protein abundance comparable between different genes and samples. All samples comes from one female donor. Median detection value represents the tissue for specificity and distribution categories. Protein detection is defined as a non-missing intensity value, and protein values are set to missing for a tissue if more than half of its replicates lacked a measurement for that protein.

Read more
Median intensity 182596
Replicate Intensity
Kidney_01
384108
Kidney_02
70887
Kidney_03
182596

KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.5
overview
Female, age 58
Kidney sample 55
nTPM: 179.2
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 144
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 121.4
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 159
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 19.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 29
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 110.2
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 35.5
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 16.7
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

299.3
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 267.4
Samples: 104

Max nTPM: 541.1
Min nTPM: 131.1
Std nTPM: 74.6
Median nTPM: 252.1
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 541.1
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 480.0
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 477.1
GTEX-15DCD-1926-SM-HAV33 70-79 years, female 465.5
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 444.0
GTEX-WL46-1926-SM-GNIN6 50-59 years, male 431.3
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 410.0
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 409.0
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 374.8
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 363.3
GTEX-1O9I2-1926-SM-F2TBQ 50-59 years, male 362.7
GTEX-1RQEC-2426-SM-F2I1J 60-69 years, male 348.3
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 343.8
GTEX-14JG1-2326-SM-HAUZ5 40-49 years, male 338.0
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 337.5
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 337.3
GTEX-QDVN-1726-SM-HL9TO 50-59 years, male 326.1
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 325.3
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 323.9
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 319.1
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 316.1
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 314.8
GTEX-1HCVE-2126-SM-HL9UO 50-59 years, male 312.0
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 311.3
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 306.3
GTEX-1ICLY-2026-SM-GA913 50-59 years, male 303.2
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 300.3
GTEX-O5YV-1226-SM-EV795 60-69 years, female 299.9
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 299.9
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 297.4
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 297.3
GTEX-13FHP-2126-SM-GIN8J 50-59 years, male 286.6
GTEX-14C39-2126-SM-664OH 40-49 years, male 282.4
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 275.9
GTEX-16Z82-2826-SM-HAUZZ 60-69 years, male 275.4
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 274.9
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 269.9
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 269.0
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 266.6
GTEX-14PJ2-1826-SM-HL9UB 50-59 years, male 266.3
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 265.8
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 265.0
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 264.6
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 264.0
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 263.3
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 263.2
GTEX-13112-2126-SM-5GCO4 50-59 years, male 263.1
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 261.0
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 259.5
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 259.1
GTEX-1117F-2126-SM-GIN9G 60-69 years, female 256.6
GTEX-1JJE9-1026-SM-HL9TH 70-79 years, male 253.3
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 250.9
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 248.5
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 248.0
GTEX-ZXG5-2026-SM-HAUZV 60-69 years, male 246.4
GTEX-NFK9-1826-SM-HL9T3 40-49 years, male 245.6
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 245.1
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 244.1
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 240.8
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 240.0
GTEX-12696-0926-SM-5FQTV 60-69 years, male 239.8
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 238.9
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 238.5
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 236.4
GTEX-16XZZ-2226-SM-HAV34 60-69 years, male 235.6
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 230.5
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 230.5
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 227.4
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 224.8
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 224.5
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 223.5
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 220.8
GTEX-1QAET-2126-SM-F2TBS 50-59 years, male 220.7
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 220.2
GTEX-13O3O-1726-SM-GJ3RL 60-69 years, female 219.4
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 219.1
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 218.1
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 217.7
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 214.4
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 212.0
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 209.1
GTEX-1LH75-1326-SM-F2I1R 50-59 years, female 208.8
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 207.8
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 206.9
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 206.7
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 205.8
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 204.9
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 203.2
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 203.1
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 202.2
GTEX-16XZY-1026-SM-HAV39 70-79 years, male 201.4
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 201.3
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 199.7
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 198.1
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 195.1
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 193.4
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 192.1
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 168.4
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 166.0
GTEX-W5X1-1626-SM-H7OGO 40-49 years, female 160.1
GTEX-RN64-1626-SM-48FD7 50-59 years, male 157.8
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 144.4
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 131.1
Show allShow less
Kidney - Medulla
Average nTPM: 299.3
Samples: 11

Max nTPM: 712.9
Min nTPM: 188.1
Std nTPM: 145.0
Median nTPM: 239.7
GTEX-N7MS-1526-SM-HAUZP 60-69 years, male 712.9
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 413.1
GTEX-QEG5-2026-SM-H6Q6I 20-29 years, male 327.3
GTEX-SIU8-1926-SM-H7OG4 50-59 years, male 282.4
GTEX-QEG4-1526-SM-GPRWK 30-39 years, male 270.1
GTEX-P4QS-1226-SM-HPAG8 60-69 years, male 239.7
GTEX-S33H-1526-SM-GQ1CB 30-39 years, male 238.3
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 220.3
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 202.5
GTEX-T6MN-1926-SM-GOQYD 50-59 years, male 197.7
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 188.1
Show allShow less

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

209.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 209.3
FF:10017-101C8 60,62,63 years, female 209.3

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