COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Low
RNA expressioni
Consensus:24.1 nTPM
HPA:22.0 nTPM
GTEx:24.1 nTPM
FANTOM5:15.7 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody CAB018365
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Low


COLON - HPA RNA-seqi
Average nTPMi 22.0
overview
Male, age 54
Colon sample 67
nTPM: 28
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 24.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 29.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 27.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 11
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 15.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 21
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 23.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 15.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 25.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 23.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 25.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 16.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 24.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 14.3
Samples: 419

Max nTPM: 49.3
Min nTPM: 3.2
Std nTPM: 5.4
Median nTPM: 13.4
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 49.3
GTEX-1OJC3-1826-SM-DTX93 20-29 years, male 39.7
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 37.5
GTEX-WHSB-1126-SM-GMXAL 50-59 years, male 36.7
GTEX-XMK1-1626-SM-HLJRZ 40-49 years, male 36.4
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 36.3
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 36.0
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 35.7
GTEX-V1D1-1626-SM-HLJSH 50-59 years, male 35.7
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 35.1
GTEX-Z9EW-1126-SM-HLJRW 40-49 years, male 34.3
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Colon - Transverse
Average nTPM: 24.1
Samples: 479

Max nTPM: 65.0
Min nTPM: 1.0
Std nTPM: 12.5
Median nTPM: 20.6
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 65.0
GTEX-1N2DV-1426-SM-DPRYQ 40-49 years, male 56.6
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 56.1
GTEX-15RIF-1326-SM-6LPKO 20-29 years, male 55.5
GTEX-1B8KZ-1326-SM-7DUG6 50-59 years, male 55.5
GTEX-S4Z8-1026-SM-72D6N 60-69 years, male 54.9
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 54.7
GTEX-R55D-1826-SM-48FEF 50-59 years, male 54.6
GTEX-1RAZR-1926-SM-E6CRF 40-49 years, male 53.8
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 52.6
GTEX-15CHR-1426-SM-7DUGV 50-59 years, male 52.6
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 15.7
FF:10014-101C5 62,83,84 years, mixed 15.7

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