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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
101.5
nTPM
GTEx:
101.5
nTPM
FANTOM5:
34.9
Scaled Tags Per Million
Pig:
27.3
nTPM
Mouse:
4.0
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
101.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 101.5
Samples: 105
Max nTPM: 246.5
Min nTPM: 37.9
Std nTPM: 43.0
Median nTPM:
149_1
88 years, male
246.5
126_1
63 years, male
221.6
162_1
79 years, female
204.3
6_1
73 years, female
200.7
43_1
64 years, female
187.5
153_1
70 years, female
187.0
466_1
57 years, female
173.6
81_1
67 years, male
171.1
518_1
75 years, female
167.7
490_1
67 years, female
159.2
32_1
67 years, male
154.8
468_1
89 years, male
154.1
9_1
66 years, female
148.4
139_1
64 years, female
146.4
18_1
88 years, male
145.7
142_1
61 years, female
144.3
415_1
77 years, female
142.9
316_1
62 years, male
142.3
491_1
89 years, female
138.6
414_1
84 years, female
138.5
89_1
63 years, male
138.4
35_1
74 years, female
134.2
217_1
76 years, male
132.3
145_1
84 years, male
130.8
425_1
59 years, female
130.6
17_1
71 years, male
128.5
526_1
61 years, male
126.7
117_1
61 years, male
126.1
307_1
66 years, female
126.0
2_1
77 years, female
125.9
503_1
68 years, male
125.0
115_1
83 years, male
123.5
251_1
78 years, male
123.1
254_1
77 years, female
120.1
480_1
63 years, male
117.0
517_1
88 years, male
115.1
291_1
76 years, male
112.9
396_1
62 years, male
111.9
4_1
88 years, female
111.8
495_1
57 years, female
110.6
389_1
86 years, female
110.2
120_1
70 years, female
109.4
315_1
62 years, female
105.4
499_1
55 years, female
105.4
319_1
81 years, male
103.2
324_1
76 years, male
101.5
288_1
66 years, female
100.8
447_1
81 years, male
100.5
109_1
81 years, female
97.9
322_1
76 years, male
97.0
413_1
59 years, female
96.6
320_1
89 years, female
96.0
246_1
77 years, male
95.9
354_1
81 years, female
95.8
292_1
71 years, male
95.1
137_1
83 years, male
92.6
314_1
67 years, male
92.3
266_1
85 years, male
90.9
265_1
87 years, male
87.7
335_1
73 years, female
86.9
348_1
84 years, male
85.8
318_1
68 years, male
85.1
311_1
78 years, male
84.7
375_1
74 years, female
84.1
313_1
79 years, female
83.3
189_1
76 years, male
82.9
352_1
62 years, male
82.6
405_1
91 years, male
81.3
377_1
82 years, female
80.8
286_1
68 years, female
78.8
404_1
82 years, female
76.4
42_1
85 years, male
73.3
501_1
88 years, male
72.9
406_1
79 years, male
72.4
229_1
69 years, female
72.0
119_1
70 years, female
71.8
243_1
75 years, male
71.1
293_1
68 years, female
70.5
386_1
76 years, male
67.4
295_1
61 years, female
65.4
394_1
75 years, female
64.7
379_1
60 years, male
63.3
355_1
70 years, female
62.3
163_1
78 years, male
61.8
172_1
72 years, female
61.7
264_1
73 years, female
61.4
376_1
75 years, female
60.1
350_1
84 years, female
58.9
384_1
83 years, male
57.8
347_1
72 years, male
57.7
41_1
94 years, female
57.2
349_1
83 years, male
56.9
351_1
91 years, male
54.6
321_1
62 years, female
53.5
237_1
82 years, male
51.7
356_1
87 years, female
48.7
99_1
64 years, male
45.6
506_1
65 years, male
45.3
353_1
82 years, female
44.9
177_1
74 years, male
43.4
308_1
70 years, female
41.9
317_1
60 years, male
41.0
173_1
67 years, male
40.2
218_1
71 years, female
38.3
452_1
88 years, female
37.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
