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RCE1
HPA
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  • TISSUE

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  • RCE1
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:7.9 nTPM
GTEx:8.3 nTPM
FANTOM5:5.2 Scaled Tags Per Million
Pig:7.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.9
Sample id Sample description nTPM
Putamen
nTPM: 7.9
1838 Male, age 80, right hemisphere 10.4
2466 Female, age 79, unknown 9.6
1829 Male, age 74, unknown 8.5
1937 Female, age 91, right hemisphere 7.7
2489 Female, age 72, unknown 7.4
2647 Male, age 75, left hemisphere 6.4
2482 Female, age 94, left hemisphere 5.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 8.3
Samples: 254

Max nTPM: 15.8
Min nTPM: 3.6
Std nTPM: 2.2
Median nTPM: 8.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 15.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 15.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 14.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 13.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 13.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 13.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 13.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 12.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 12.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 12.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 12.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 12.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 11.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 11.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 11.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 11.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 11.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 11.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 11.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 11.4
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 11.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 11.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 11.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 11.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 11.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 11.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 11.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 11.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 11.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 10.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 10.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 10.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 10.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 10.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 10.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 10.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 10.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 10.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 10.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 10.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 10.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 10.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 10.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 10.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 10.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 10.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 10.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 10.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 10.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 10.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 10.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 9.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 9.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 9.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 9.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 9.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 9.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 9.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 9.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 9.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 9.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 9.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 9.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 9.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 9.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 9.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 9.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 9.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 9.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 9.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 9.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 9.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 9.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 9.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 9.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 9.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 9.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 9.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 9.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 9.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 9.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 9.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 9.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 9.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 9.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 9.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 9.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 9.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 9.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 9.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 9.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 9.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 9.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 9.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 9.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 8.9
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 8.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 8.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 8.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 8.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 8.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 8.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 8.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 8.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 8.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 8.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 8.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 8.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 8.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 8.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 8.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 8.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 8.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 8.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 8.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 8.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 8.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 8.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 8.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 8.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 8.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 8.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 8.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 8.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 8.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 8.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 8.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 8.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 8.0
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 8.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 8.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 8.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 8.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 8.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 7.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 7.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 7.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 7.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 7.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 7.8
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 7.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 7.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 7.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 7.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 7.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 7.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 7.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 7.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 7.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 7.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 7.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 7.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 7.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 7.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 7.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 7.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 7.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 7.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 7.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 7.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 7.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 7.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 7.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 6.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 6.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 6.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 6.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 6.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 6.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 6.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 6.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 6.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 6.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 6.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 6.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 6.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 6.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 6.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 6.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 6.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 6.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 6.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 6.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 6.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 6.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 6.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 6.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 6.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 6.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 6.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 6.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 6.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 6.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 6.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 6.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 6.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 6.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 6.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 6.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 6.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 6.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 5.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 5.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 5.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 5.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 5.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 5.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 5.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 5.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 5.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 5.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 5.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 5.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 5.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 5.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 5.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 4.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 4.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 4.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 4.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 4.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 4.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 4.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 4.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 4.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 4.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 4.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 4.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 4.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 4.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 4.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 4.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 4.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 4.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 3.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 3.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 5.2
FF:10176-103C5 60 years, female 5.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.5
Pig sample Sample description nTPM
Putamen
nTPM: 7.5
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.9
Sample A Female 7.1
Sample B Female 6.9
Sample C Male 8.5
Sample D Male 7.4

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