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TISSUE PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:14.7 nTPM
GTEx:10.1 nTPM
FANTOM5:14.8 Scaled Tags Per Million
Pig:7.7 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.7
Sample id Sample description nTPM
Putamen
nTPM: 14.7
2466 Female, age 79, unknown 19.8
2482 Female, age 94, left hemisphere 18.8
2489 Female, age 72, unknown 18.7
1829 Male, age 74, unknown 12.7
1838 Male, age 80, right hemisphere 11.6
1937 Female, age 91, right hemisphere 11.2
2647 Male, age 75, left hemisphere 9.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 10.1
Samples: 254

Max nTPM: 27.3
Min nTPM: 2.2
Std nTPM: 4.5
Median nTPM: 9.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 27.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 21.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 20.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 20.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 20.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 20.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 20.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 20.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 20.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 19.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 19.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 19.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 19.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 19.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 19.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 18.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 18.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 17.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 17.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 17.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 17.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 17.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 17.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 17.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 16.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 16.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 16.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 16.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 16.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 16.1
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 15.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 15.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 15.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 15.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 15.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 15.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 15.4
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 15.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 15.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 14.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 14.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 14.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 14.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 14.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 14.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 14.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 14.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 14.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 14.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 14.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 14.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 14.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 13.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 13.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 13.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 13.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 13.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 13.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 13.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 13.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 13.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 13.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 13.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 13.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 13.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 13.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 13.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 13.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 12.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 12.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 12.8
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 12.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 12.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 12.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 12.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 12.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 12.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 12.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 12.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 12.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 12.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 11.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 11.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 11.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 11.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 11.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 11.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 11.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 11.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 11.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 11.4
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 11.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 11.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 11.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 11.1
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 11.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 11.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 10.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 10.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 10.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 10.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 10.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 10.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 10.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 10.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 10.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 10.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 10.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 10.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 10.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 10.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 9.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 9.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 9.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 9.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 9.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 9.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 9.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 9.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 9.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 9.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 9.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 9.4
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 9.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 9.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 9.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 9.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 9.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 9.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 9.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 9.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 9.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 9.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 9.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 9.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 8.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 8.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 8.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 8.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 8.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 8.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 8.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 8.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 8.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 8.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 8.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 8.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 8.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 8.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 8.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 8.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 8.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 8.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 8.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 8.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 8.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 8.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 8.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 7.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 7.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 7.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 7.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 7.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 7.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 7.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 7.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 7.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 7.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 7.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 7.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 7.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 7.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 7.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 6.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 6.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 6.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 6.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 6.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 6.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 6.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 6.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 6.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 6.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 6.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 6.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 6.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 6.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 6.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 6.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 6.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 6.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 6.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 6.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 6.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 6.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 6.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 6.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 6.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 5.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 5.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 5.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 5.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 5.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 5.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 5.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 5.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 5.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 5.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 5.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 5.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 5.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 5.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 5.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 5.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 5.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 4.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 4.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 4.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 4.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 4.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 4.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 4.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 4.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 4.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 4.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 4.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 4.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 4.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 4.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 4.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 4.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 4.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 3.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 3.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 3.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 3.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 3.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 3.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 3.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 3.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 3.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 3.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 2.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 2.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 2.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

14.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 14.8
FF:10176-103C5 60 years, female 14.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.7
Pig sample Sample description nTPM
Putamen
nTPM: 7.7
Samples: 4

Max nTPM: 10.8
Min nTPM: 5.4
Sample A Female 5.4
Sample B Female 7.0
Sample C Male 10.8
Sample D Male 7.6

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