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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
149.2
nTPM
GTEx:
149.2
nTPM
FANTOM5:
66.9
Scaled Tags Per Million
Pig:
6.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
149.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 149.2
Samples: 105
Max nTPM: 367.1
Min nTPM: 85.8
Std nTPM: 54.6
Median nTPM: 0.0
109_1
81 years, female
367.1
491_1
89 years, female
322.1
162_1
79 years, female
307.0
315_1
62 years, female
293.0
137_1
83 years, male
289.4
490_1
67 years, female
279.8
394_1
75 years, female
258.7
4_1
88 years, female
235.5
6_1
73 years, female
234.7
145_1
84 years, male
209.3
379_1
60 years, male
203.8
354_1
81 years, female
201.9
142_1
61 years, female
200.2
452_1
88 years, female
199.6
288_1
66 years, female
194.1
117_1
61 years, male
191.2
99_1
64 years, male
190.7
32_1
67 years, male
187.9
335_1
73 years, female
185.6
18_1
88 years, male
184.2
317_1
60 years, male
183.7
17_1
71 years, male
183.3
173_1
67 years, male
181.9
415_1
77 years, female
175.6
254_1
77 years, female
173.1
466_1
57 years, female
172.5
43_1
64 years, female
171.1
149_1
88 years, male
169.5
218_1
71 years, female
165.1
120_1
70 years, female
164.9
9_1
66 years, female
164.8
351_1
91 years, male
164.8
81_1
67 years, male
164.6
313_1
79 years, female
164.6
291_1
76 years, male
161.4
115_1
83 years, male
160.4
526_1
61 years, male
160.3
126_1
63 years, male
157.0
375_1
74 years, female
156.2
243_1
75 years, male
153.1
501_1
88 years, male
152.5
518_1
75 years, female
150.7
349_1
83 years, male
148.5
389_1
86 years, female
148.4
350_1
84 years, female
147.5
217_1
76 years, male
147.1
89_1
63 years, male
144.9
35_1
74 years, female
143.3
119_1
70 years, female
141.3
153_1
70 years, female
141.3
499_1
55 years, female
140.7
308_1
70 years, female
140.0
264_1
73 years, female
139.4
386_1
76 years, male
139.4
468_1
89 years, male
139.3
324_1
76 years, male
138.9
384_1
83 years, male
138.0
139_1
64 years, female
136.8
42_1
85 years, male
132.0
396_1
62 years, male
131.3
41_1
94 years, female
130.0
229_1
69 years, female
128.8
495_1
57 years, female
126.8
265_1
87 years, male
126.6
295_1
61 years, female
125.3
314_1
67 years, male
124.8
414_1
84 years, female
120.2
307_1
66 years, female
120.1
447_1
81 years, male
116.0
322_1
76 years, male
114.4
189_1
76 years, male
114.0
237_1
82 years, male
111.7
517_1
88 years, male
111.2
316_1
62 years, male
110.9
425_1
59 years, female
110.8
319_1
81 years, male
110.1
503_1
68 years, male
108.2
347_1
72 years, male
107.9
480_1
63 years, male
107.9
266_1
85 years, male
107.4
355_1
70 years, female
107.2
251_1
78 years, male
106.7
413_1
59 years, female
106.6
2_1
77 years, female
105.1
320_1
89 years, female
104.0
353_1
82 years, female
102.8
246_1
77 years, male
102.6
177_1
74 years, male
101.5
506_1
65 years, male
101.0
348_1
84 years, male
100.5
311_1
78 years, male
100.0
352_1
62 years, male
99.2
377_1
82 years, female
96.2
405_1
91 years, male
94.6
406_1
79 years, male
92.0
286_1
68 years, female
91.4
404_1
82 years, female
90.5
163_1
78 years, male
90.0
172_1
72 years, female
90.0
321_1
62 years, female
87.9
356_1
87 years, female
87.8
292_1
71 years, male
87.7
376_1
75 years, female
87.5
318_1
68 years, male
87.3
293_1
68 years, female
85.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.