HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:124.2 nTPM
HPA Brain:601.6 nTPM
GTEx:124.2 nTPM
FANTOM5:414.0 Scaled Tags Per Million
Pig:514.5 nTPM
Mouse:374.4 nTPM
Allen mouse:8.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 601.6
Sample id Sample description nTPM
Hippocampus
nTPM: 392.5
1898 Male, age 80, left hemisphere 526.6
1855 Male, age 76, left hemisphere 474.4
2621 Female, age 67, right hemisphere 455.4
2148 Female, age 91, left hemisphere 439.7
1911 Female, age 85, right hemisphere 281.6
2529 Female, age 94, left hemisphere 177.6
Dentate gyrus
nTPM: 474.9
1927 Female, age 91, both hemispheres 713.9
2010 Male, age 76, both hemispheres 573.8
2530 Female, age 94, left hemisphere 486.0
2531 Female, age 67, both hemispheres 399.3
2246 Female, age 85, both hemispheres 364.4
2528 Male, age 74, both hemispheres 312.0
Entorhinal gyrus
nTPM: 257.0
2764 Male, age 80, right hemisphere 391.6
1787 Male, age 76, left hemisphere 313.0
1938 Female, age 85, left hemisphere 262.5
2613 Female, age 94, left hemisphere 219.6
2117 Female, age 91, right hemisphere 202.1
2686 Male, age 75, right hemisphere 153.4
Hippocampus, CA1
nTPM: 601.6
2749 Male, age 80, left hemisphere 1208.4
2045 Male, age 76, both hemispheres 515.0
1873 Female, age 85, both hemispheres 483.2
2527 Male, age 74, both hemispheres 432.2
2082 Female, age 91, right hemisphere 369.3
Hippocampus, CA2
nTPM: 408.0
1963 Male, age 80, left hemisphere 631.0
1892 Male, age 76, both hemispheres 563.9
2113 Female, age 91, right hemisphere 365.8
2249 Male, age 74, both hemispheres 348.2
1940 Female, age 85, left hemisphere 337.9
2437 Female, age 94, left hemisphere 201.1
Hippocampus, CA3
nTPM: 458.6
2137 Male, age 80, left hemisphere 868.2
1867 Male, age 76, both hemispheres 484.6
2620 Female, age 94, left hemisphere 470.6
2861 Female, age 67, both hemispheres 407.7
2436 Male, age 74, both hemispheres 316.1
1891 Female, age 85, both hemispheres 204.3
Parahippocampal cortex
nTPM: 357.7
2245 Female, age 91, both hemispheres 518.3
1850 Male, age 80, both hemispheres 454.8
2250 Female, age 67, right hemisphere 402.5
2693 Female, age 94, both hemispheres 402.5
1933 Female, age 85, both hemispheres 388.0
1990 Female, age 91, right hemisphere 367.5
2532 Female, age 72, left hemisphere 337.2
2018 Male, age 76, both hemispheres 332.4
2622 Female, age 67, right hemisphere 257.8
2692 Male, age 74, both hemispheres 116.3
Perirhinal gyrus
nTPM: 563.9
1847 Female, age 91, left hemisphere 775.1
2521 Female, age 94, right hemisphere 711.5
1794 Male, age 80, right hemisphere 554.8
1841 Female, age 85, right hemisphere 475.8
2848 Male, age 76, right hemisphere 302.1
Subiculum
nTPM: 248.2
1901 Male, age 80, both hemispheres 379.3
1977 Female, age 85, both hemispheres 283.9
2729 Female, age 91, right hemisphere 278.3
2042 Male, age 76, both hemispheres 272.0
2619 Male, age 74, both hemispheres 181.2
2438 Female, age 94, left hemisphere 94.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 124.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 124.2
Samples: 255

Max nTPM: 529.3
Min nTPM: 2.2
Std nTPM: 100.0
Median nTPM: 98.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 529.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 434.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 418.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 396.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 368.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 362.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 342.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 338.5
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 334.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 327.0
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 324.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 414.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 414.0
FF:10169-103B7 60 years, female 609.6
FF:10153-102I9 76 years, female 218.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 514.5
Pig sample Sample description nTPM
Subiculum
nTPM: 321.0
Samples: 4

Max nTPM: 430.0
Min nTPM: 243.9
Sample A Female 430.0
Sample B Female 290.1
Sample C Male 243.9
Sample D Male 319.9
Dorsal hippocampus
nTPM: 492.4
Samples: 4

Max nTPM: 622.0
Min nTPM: 270.5
Sample A Female 622.0
Sample B Female 605.3
Sample C Male 270.5
Sample D Male 471.7
Entorhinal cortex
nTPM: 514.5
Samples: 4

Max nTPM: 571.8
Min nTPM: 463.7
Sample A Female 571.8
Sample B Female 486.3
Sample C Male 536.2
Sample D Male 463.7
Ventral hippocampus
nTPM: 303.3
Samples: 4

Max nTPM: 502.4
Min nTPM: 219.1
Sample A Female 252.5
Sample B Female 219.1
Sample C Male 239.2
Sample D Male 502.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 374.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 280.2
Samples: 4

Max nTPM: 340.7
Min nTPM: 250.2
Sample A Male 250.2
Sample B Male 270.5
Sample C Female 259.5
Sample D Female 340.7
Hippocampal formation
nTPM: 374.5
Samples: 4

Max nTPM: 478.2
Min nTPM: 295.2
Sample A Male 295.2
Sample B Male 421.4
Sample C Female 478.2
Sample D Female 303.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
391 Antisense, RP_Baylor_102756, Mouse strain C57BL/6J (56 days, male) 8.8
390 Antisense, RP_Baylor_102756, Mouse strain C57BL/6J (56 days, male) 5.4

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