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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Not detected
Ovarian stroma cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2837.1 nTPM
HPA:1676.6 nTPM
GTEx:2837.1 nTPM
FANTOM5:147.1 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody CAB008623
Ovarian stroma cells Medium



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1676.6
overview
Female, age 64
Ovary sample 192
nTPM: 1647.4
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 1849.7
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 1910
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 1427.8
N/A
Female, age 16
Ovary sample 3663
nTPM: 1830.1
N/A
Female, age 20
Ovary sample 3664
nTPM: 1384.1
N/A
Female, age 32
Ovary sample 3665
nTPM: 1687

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2837.1
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 2837.1
Samples: 193

Max nTPM: 6236.5
Min nTPM: 1587.5
Std nTPM: 860.2
Median nTPM: 2591.2
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 6236.5
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 5802.1
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 5481.9
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 5478.9
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 5469.1
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 5333.6
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 5056.5
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 4984.1
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 4913.0
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 4781.4
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 4675.0
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 4572.3
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 4521.4
GTEX-15EOM-1526-SM-68723 20-29 years, female 4503.9
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 4338.5
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 4310.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 4303.9
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 4130.7
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 4070.4
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 4044.5
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 3948.0
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 3882.0
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 3803.5
GTEX-183WM-1926-SM-72D5F 70-79 years, female 3723.5
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 3711.3
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 3671.1
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 3624.1
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 3619.8
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 3475.9
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 3466.8
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 3438.6
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 3422.9
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 3421.2
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 3417.6
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 3409.5
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 3382.4
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 3362.3
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 3350.1
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 3341.3
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 3331.4
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 3309.8
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 3293.1
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 3262.8
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 3242.9
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 3209.9
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 3198.3
GTEX-QVJO-3126-SM-COH22 60-69 years, female 3188.0
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 3173.0
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 3137.7
GTEX-S32W-1226-SM-4AD67 50-59 years, female 3111.0
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 3082.4
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 3077.9
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 3073.5
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 3060.3
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 3049.5
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 3045.6
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 3039.6
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 3027.8
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 3023.5
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 3018.6
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 3017.6
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 3017.3
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 3002.1
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 2985.1
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 2937.9
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 2932.4
GTEX-R45C-2526-SM-GRR28 60-69 years, female 2930.0
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 2894.3
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 2888.2
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 2870.3
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2868.6
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 2863.6
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 2839.7
GTEX-R55G-1526-SM-48FER 40-49 years, female 2802.6
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 2795.1
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 2779.9
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 2778.2
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 2766.5
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 2764.8
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 2764.0
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 2763.3
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 2758.1
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 2747.2
GTEX-13SLX-2426-SM-664OM 50-59 years, female 2724.8
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 2697.9
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2695.0
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 2684.1
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 2667.3
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 2663.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2658.0
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 2637.6
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 2633.0
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 2621.9
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 2614.9
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 2614.9
GTEX-11I78-1926-SM-59878 50-59 years, female 2613.4
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 2591.2
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 2586.4
GTEX-P78B-1926-SM-3P616 40-49 years, female 2563.8
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 2547.4
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 2546.4
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 2541.1
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 2536.1
GTEX-QCQG-1426-SM-48U22 50-59 years, female 2536.1
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 2534.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 2528.6
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 2526.1
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 2511.7
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 2508.4
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 2499.4
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 2497.3
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 2495.8
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 2495.3
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 2494.2
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 2489.6
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 2481.8
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 2477.7
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 2477.6
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 2471.1
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 2454.0
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2451.7
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 2447.2
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 2442.2
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 2439.1
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 2427.4
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2426.5
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2422.2
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 2408.3
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 2403.4
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 2392.5
GTEX-14BIN-1426-SM-664NI 50-59 years, female 2385.2
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 2376.7
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 2373.8
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 2370.6
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 2368.5
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 2365.1
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 2364.7
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 2363.9
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 2341.8
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 2340.2
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 2335.1
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 2302.9
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 2286.8
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 2285.6
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 2284.2
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2265.3
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 2256.1
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 2251.3
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 2249.4
GTEX-S341-0726-SM-4AD5R 40-49 years, female 2248.1
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 2239.4
GTEX-14PKV-1226-SM-6871T 20-29 years, female 2220.2
GTEX-Q734-0726-SM-48TZP 40-49 years, female 2206.5
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 2193.9
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 2178.8
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 2168.4
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 2167.9
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 2159.8
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 2134.4
GTEX-14JG6-0626-SM-68716 30-39 years, female 2131.9
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 2130.9
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2116.0
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 2105.7
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 2100.8
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 2097.9
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 2096.3
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 2081.7
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 2078.1
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 2074.7
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 2048.6
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 2035.1
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 2025.4
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2025.0
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 2010.5
GTEX-18D9A-0826-SM-718C1 30-39 years, female 2004.1
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 2002.0
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 1992.9
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 1992.4
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 1958.0
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 1934.5
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 1922.4
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 1921.2
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 1867.4
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 1836.6
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 1824.6
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 1820.2
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 1796.7
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 1757.8
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 1733.0
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1722.1
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 1636.8
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1618.5
GTEX-145ME-1226-SM-5MR87 40-49 years, female 1587.5
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OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

147.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 147.1
FF:10020-101D2 47,75,84 years, female 147.1

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