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  • TISSUE

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TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:73.3 nTPM
GTEx:33.2 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Pig:57.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.3
Sample id Sample description nTPM
Putamen
nTPM: 73.3
2482 Female, age 94, left hemisphere 100.2
2489 Female, age 72, unknown 92.9
2647 Male, age 75, left hemisphere 87.6
1829 Male, age 74, unknown 86.2
1937 Female, age 91, right hemisphere 58.9
2466 Female, age 79, unknown 52.7
1838 Male, age 80, right hemisphere 34.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.2
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 33.2
Samples: 254

Max nTPM: 111.2
Min nTPM: 10.5
Std nTPM: 12.0
Median nTPM: 32.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 111.2
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 72.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 70.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 64.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 60.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 58.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 57.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 54.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 54.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 54.2
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 54.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 53.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 53.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 53.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 52.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 52.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 51.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 51.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 51.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 50.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 50.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 49.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 49.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 49.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 49.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 49.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 49.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 48.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 47.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 47.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 47.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 47.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 47.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 46.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 46.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 46.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 45.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 44.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 44.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 44.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 44.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 44.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 44.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 43.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 43.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 43.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 43.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 42.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 42.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 42.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 41.9
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 41.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 41.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 41.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 41.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 41.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 40.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 40.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 40.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 40.0
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 39.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 39.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 39.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 39.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 39.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 38.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 38.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 38.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 38.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 37.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 37.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 37.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 37.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 37.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 37.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 36.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 36.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 36.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 36.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 36.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 36.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 36.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 36.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 36.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 36.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 36.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 36.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 35.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 35.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 35.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 35.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 35.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 35.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 35.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 35.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 35.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 35.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 35.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 35.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 34.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 34.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 34.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 34.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 34.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 34.4
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 34.3
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 34.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 34.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 34.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 34.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 33.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 33.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 33.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 33.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 33.4
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 33.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 33.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 32.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 32.7
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 32.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 32.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 32.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 32.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 32.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 32.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 32.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 31.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 31.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 31.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 31.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 31.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 30.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 30.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 30.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 30.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 30.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 30.4
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 30.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 30.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 30.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 30.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 29.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 29.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 29.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 29.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 29.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 29.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 29.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 29.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 29.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 29.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 29.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 29.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 29.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 29.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 28.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 28.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 28.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 28.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 28.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 28.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 28.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 28.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 28.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 27.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 27.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 27.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 27.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 27.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 27.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 27.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 27.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 27.2
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 27.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 26.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 26.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 26.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 26.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 26.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 26.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 26.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 26.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 25.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 25.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 25.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 25.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 25.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 24.9
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 24.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 24.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 24.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 24.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 24.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 24.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 23.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 23.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 23.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 23.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 23.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 23.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 23.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 23.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 23.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 22.4
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 22.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 22.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 22.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 21.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 21.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 21.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 21.5
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 21.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 21.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 21.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 20.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 20.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 20.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 20.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 20.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 20.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 20.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 20.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 20.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 20.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 20.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 20.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 20.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 19.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 19.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 19.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 19.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 19.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 19.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 18.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 18.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 18.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 18.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 17.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 17.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 17.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 17.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 16.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 16.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 16.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 16.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 15.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 15.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 15.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 11.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 11.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 11.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 10.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 37.1
FF:10176-103C5 60 years, female 37.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.8
Pig sample Sample description nTPM
Putamen
nTPM: 57.8
Samples: 4

Max nTPM: 83.4
Min nTPM: 42.3
Sample A Female 83.4
Sample B Female 42.3
Sample C Male 46.7
Sample D Male 58.9

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