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  • TISSUE

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  • BAALC
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:197.7 nTPM
GTEx:274.0 nTPM
FANTOM5:259.1 Scaled Tags Per Million
Pig:66.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

197.7
Sample id Sample description nTPM
Putamen
nTPM: 197.7
2482 Female, age 94, left hemisphere 292.3
2647 Male, age 75, left hemisphere 240.2
2489 Female, age 72, unknown 237.4
2466 Female, age 79, unknown 171.0
1829 Male, age 74, unknown 159.6
1937 Female, age 91, right hemisphere 142.7
1838 Male, age 80, right hemisphere 140.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

274.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 274.0
Samples: 254

Max nTPM: 792.2
Min nTPM: 71.6
Std nTPM: 117.6
Median nTPM: 252.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 792.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 639.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 565.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 565.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 547.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 546.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 544.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 542.7
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 524.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 518.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 517.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 500.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 497.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 495.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 492.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 468.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 457.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 449.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 448.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 447.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 444.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 438.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 437.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 437.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 436.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 435.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 426.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 424.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 424.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 423.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 416.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 416.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 415.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 414.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 412.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 409.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 409.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 406.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 405.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 402.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 400.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 390.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 390.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 388.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 386.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 382.4
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 381.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 376.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 375.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 375.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 375.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 374.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 370.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 368.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 367.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 365.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 365.4
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 365.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 364.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 359.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 358.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 355.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 354.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 353.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 348.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 348.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 347.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 345.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 343.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 340.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 338.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 333.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 331.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 330.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 329.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 326.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 325.7
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 325.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 323.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 322.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 321.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 318.6
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 316.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 313.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 313.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 312.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 311.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 311.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 310.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 306.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 297.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 295.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 294.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 294.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 292.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 291.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 291.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 291.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 290.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 288.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 287.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 285.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 282.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 281.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 277.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 276.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 276.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 275.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 274.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 273.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 270.6
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 264.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 263.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 262.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 260.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 260.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 259.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 259.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 258.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 258.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 258.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 257.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 256.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 255.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 254.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 254.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 252.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 251.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 248.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 247.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 247.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 246.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 245.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 244.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 244.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 243.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 242.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 239.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 237.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 237.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 236.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 235.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 234.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 233.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 231.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 229.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 229.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 229.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 229.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 228.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 228.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 226.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 225.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 224.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 222.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 219.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 217.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 216.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 216.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 215.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 215.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 214.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 214.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 210.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 208.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 208.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 208.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 207.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 207.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 206.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 205.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 204.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 204.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 203.2
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 202.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 202.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 202.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 201.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 201.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 201.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 200.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 200.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 200.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 200.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 197.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 197.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 196.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 196.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 192.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 189.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 188.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 186.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 182.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 181.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 180.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 179.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 177.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 177.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 176.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 176.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 176.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 174.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 172.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 170.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 170.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 168.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 168.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 167.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 167.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 166.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 165.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 163.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 163.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 163.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 162.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 162.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 160.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 159.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 158.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 158.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 156.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 156.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 153.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 152.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 148.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 144.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 144.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 143.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 143.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 138.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 131.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 131.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 130.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 128.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 127.7
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 126.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 125.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 124.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 123.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 122.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 113.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 112.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 108.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 105.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 103.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 102.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 101.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 95.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 92.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 90.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 89.1
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 82.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 81.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 71.6
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

259.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 259.1
FF:10176-103C5 60 years, female 259.1

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.8
Pig sample Sample description nTPM
Putamen
nTPM: 66.8
Samples: 4

Max nTPM: 75.1
Min nTPM: 59.7
Sample A Female 72.0
Sample B Female 60.4
Sample C Male 75.1
Sample D Male 59.7

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