We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MOCS2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • MOCS2
TISSUE PRIMARY DATA PUTAMEN Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:45.9 nTPM
GTEx:82.3 nTPM
FANTOM5:112.9 Scaled Tags Per Million
Pig:30.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.9
Sample id Sample description nTPM
Putamen
nTPM: 45.9
1838 Male, age 80, right hemisphere 53.1
1937 Female, age 91, right hemisphere 52.4
2466 Female, age 79, unknown 51.7
2482 Female, age 94, left hemisphere 51.5
1829 Male, age 74, unknown 49.5
2647 Male, age 75, left hemisphere 34.1
2489 Female, age 72, unknown 28.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 82.3
Samples: 254

Max nTPM: 163.1
Min nTPM: 43.6
Std nTPM: 21.6
Median nTPM: 79.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 163.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 151.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 138.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 137.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 136.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 136.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 132.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 129.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 127.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 125.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 124.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 123.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 122.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 122.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 122.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 121.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 121.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 120.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 118.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 117.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 117.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 115.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 113.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 113.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 112.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 110.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 109.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 109.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 109.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 109.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 108.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 108.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 107.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 107.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 106.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 106.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 105.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 104.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 103.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 102.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 102.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 102.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 102.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 101.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 101.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 101.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 101.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 100.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 100.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 100.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 99.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 99.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 99.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 98.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 98.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 98.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 98.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 98.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 97.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 97.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 97.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 96.3
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 95.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 95.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 95.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 95.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 94.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 94.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 94.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 94.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 93.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 93.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 93.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 93.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 92.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 92.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 92.3
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 90.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 90.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 90.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 89.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 89.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 89.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 89.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 89.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 89.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 89.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 88.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 88.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 88.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 88.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 87.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 87.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 87.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 87.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 87.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 87.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 86.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 86.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 85.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 85.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 85.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 85.0
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 84.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 84.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 84.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 83.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 83.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 83.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 83.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 82.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 82.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 82.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 81.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 81.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 81.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 81.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 81.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 81.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 81.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 81.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 80.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 80.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 80.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 80.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 79.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 79.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 79.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 78.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 78.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 78.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 78.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 78.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 78.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 78.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 77.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 77.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 76.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 76.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 76.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 76.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 76.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 75.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 75.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 75.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 75.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 75.5
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 75.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 75.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 75.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 73.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 73.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 73.8
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 73.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 73.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 73.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 72.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 72.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 72.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 72.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 72.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 72.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 71.6
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 71.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 71.2
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 71.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 70.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 70.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 70.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 69.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 69.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 69.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 69.3
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 69.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 69.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 69.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 68.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 68.6
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 68.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 68.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 68.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 67.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 67.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 67.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 67.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 67.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 67.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 66.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 66.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 66.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 66.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 65.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 65.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 65.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 65.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 64.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 64.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 64.0
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 63.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 63.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 63.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 62.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 62.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 61.9
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 61.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 61.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 61.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 61.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 61.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 60.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 60.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 60.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 60.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 60.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 59.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 59.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 59.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 59.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 58.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 58.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 58.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 57.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 56.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 56.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 56.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 56.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 56.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 56.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 56.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 55.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 55.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 55.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 54.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 54.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 54.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 54.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 54.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 53.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 53.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 53.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 52.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 52.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 52.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 52.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 51.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 51.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 50.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 49.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 49.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 48.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 48.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 43.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 43.6
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

112.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 112.9
FF:10176-103C5 60 years, female 112.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.1
Pig sample Sample description nTPM
Putamen
nTPM: 30.1
Samples: 4

Max nTPM: 48.9
Min nTPM: 20.6
Sample A Female 25.6
Sample B Female 25.3
Sample C Male 48.9
Sample D Male 20.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo