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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1199.6
nTPM
HPA Brain:
104.2
nTPM
GTEx:
1199.6
nTPM
FANTOM5:
18.7
Scaled Tags Per Million
Pig:
26.3
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
104.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 73.8
2411
Female, age 72, unknown
97.4
2666
Male, age 74, left hemisphere
89.9
1870
Female, age 42, unknown
85.3
1827
Male, age 72, unknown
75.3
2586
Male, age 75, left hemisphere
74.1
2828
Female, age 72, unknown
72.3
2019
Male, age 18, unknown
70.3
1830
Male, age 51, unknown
65.0
2219
Male, age 76, both hemispheres
61.3
1833
Male, age 53, unknown
47.0
Dorsal raphe nucleus nTPM: 72.1
2298
Female, age 72, unknown
93.2
2016
Female, age 72, unknown
77.9
2750
Male, age 76, both hemispheres
72.0
2047
Male, age 72, unknown
67.4
1828
Male, age 53, unknown
49.9
Inferior colliculus nTPM: 80.5
2097
Female, age 72, unknown
111.0
2849
Male, age 72, unknown
73.6
1890
Male, age 53, unknown
69.3
1848
Female, age 42, unknown
68.1
Median raphe nucleus nTPM: 65.3
2220
Male, age 76, midline
65.3
Periaquaductal grey, anterior nTPM: 80.7
2502
Female, age 75, unknown
93.3
1795
Male, age 51, unknown
79.8
1947
Male, age 18, unknown
69.1
Periaquaductal grey, dorsal nTPM: 70.8
2464
Female, age 72, unknown
86.6
1831
Male, age 72, unknown
68.6
1840
Male, age 53, unknown
65.7
2850
Male, age 76, both hemispheres
62.3
Periaquaductal grey, lateral nTPM: 62.9
2053
Male, age 18, unknown
77.0
2140
Male, age 76, both hemispheres
61.5
2272
Male, age 74, both hemispheres
50.3
Pretectal area nTPM: 73.1
1816
Male, age 51, unknown
101.2
2316
Male, age 76, right hemisphere
79.6
2224
Female, age 72, unknown
78.5
2825
Male, age 18, unknown
73.7
2273
Male, age 74, both hemispheres
73.1
1817
Female, age 42, unknown
70.8
2667
Female, age 75, unknown
70.1
2007
Male, age 72, unknown
68.7
1944
Female, age 72, unknown
63.6
1815
Male, age 53, unknown
63.0
2407
Male, age 75, both hemispheres
61.9
Red nucleus nTPM: 76.5
2503
Female, age 72, unknown
93.3
1821
Female, age 72, unknown
92.5
1865
Male, age 51, unknown
86.8
2769
Male, age 72, unknown
79.6
2584
Male, age 75, left hemisphere
79.0
2227
Male, age 72, unknown
76.1
2785
Male, age 18, unknown
74.1
2588
Male, age 74, left hemisphere
73.6
1954
Female, age 42, unknown
69.6
2725
Female, age 75, unknown
67.1
2823
Male, age 76, right hemisphere
63.5
1904
Male, age 53, unknown
62.7
Substantia nigra nTPM: 87.1
1851
Male, age 51, unknown
113.6
2409
Female, age 72, unknown
110.1
2241
Male, age 72, unknown
106.6
2665
Male, age 74, both hemispheres
96.0
2699
Male, age 18, unknown
92.7
1916
Female, age 42, unknown
82.0
2590
Female, age 75, unknown
78.6
1889
Female, age 72, unknown
73.5
2583
Male, age 75, right hemisphere
63.6
1941
Male, age 53, unknown
54.6
Superior colliculus nTPM: 85.0
1796
Male, age 53, unknown
147.9
2587
Male, age 74, left hemisphere
118.0
2668
Female, age 75, unknown
88.8
1913
Female, age 42, unknown
76.7
1895
Male, age 76, right hemisphere
76.0
2261
Male, age 18, unknown
72.7
1995
Male, age 72, unknown
72.1
2664
Male, age 75, both hemispheres
69.2
2087
Female, age 72, unknown
65.3
1839
Male, age 51, unknown
62.8
Ventral tegmental area nTPM: 104.2
2021
Male, age 53, unknown
273.0
1915
Female, age 42, unknown
89.3
2223
Female, age 72, unknown
86.5
2218
Male, age 76, both hemispheres
61.4
1942
Male, age 51, unknown
59.1
2410
Female, age 72, unknown
55.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1199.6
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 1199.6
Samples: 139
Max nTPM: 4448.8
Min nTPM: 477.2
Std nTPM: 571.5
Median nTPM: 1078.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
4448.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
3375.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
2796.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
2753.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
2604.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
2511.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
2451.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
2269.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
2246.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
2160.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
2091.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1930.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
1907.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
1806.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1774.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1750.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
1749.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
1716.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1695.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1684.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
1641.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1637.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
1605.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1568.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
1554.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
1519.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1517.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
1504.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
1495.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
1442.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
1438.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1422.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1413.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
1400.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
1395.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1366.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1334.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
1299.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
1291.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
1282.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
1279.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
1260.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
1258.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
1256.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
1236.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1219.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
1208.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1205.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
1201.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1189.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
1181.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1173.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
1171.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
1163.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
1160.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
1159.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
1148.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
1146.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
1143.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
1133.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
1132.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
1118.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1117.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
1112.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
1109.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
1102.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
1094.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
1088.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
1084.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
1078.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
1054.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
1046.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1043.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
1025.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
1023.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
1017.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
1005.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
1003.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
1000.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
995.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
982.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
979.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
976.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
972.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
971.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
964.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
957.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
954.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
953.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
944.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
938.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
936.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
933.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
921.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
909.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
907.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
880.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
879.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
861.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
859.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
857.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
854.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
849.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
846.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
831.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
826.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
819.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
814.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
809.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
805.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
803.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
802.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
798.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
798.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
794.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
776.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
754.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
753.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
745.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
735.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
722.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
713.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
713.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
688.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
673.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
668.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
667.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
656.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
644.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
638.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
637.8
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
634.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
616.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
594.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
586.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
580.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
559.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
502.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
477.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.