COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Low
Peripheral nerve/ganglion: High
RNA expressioni
Consensus:53.9 nTPM
HPA:28.7 nTPM
GTEx:53.9 nTPM
FANTOM5:32.1 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION

COLON - Antibody stainingi
Antibody HPA006986
Endothelial cells Low
Glandular cells Low
Peripheral nerve/ganglion High


COLON - HPA RNA-seqi
Average nTPMi 28.7
overview
Male, age 54
Colon sample 67
nTPM: 21.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 21.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 24.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 15.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 17.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 33.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 37.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 37.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 32.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 36.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 31.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 31.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 31.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 53.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 53.9
Samples: 419

Max nTPM: 112.7
Min nTPM: 30.9
Std nTPM: 10.6
Median nTPM: 52.8
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 112.7
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 107.0
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 104.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 91.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 89.7
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 89.2
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 81.1
GTEX-WI4N-2226-SM-4M9QL 40-49 years, female 80.3
GTEX-11O72-2526-SM-GJ3PW 40-49 years, male 80.2
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 80.2
GTEX-15UF6-2726-SM-7KULY 70-79 years, female 79.1
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Colon - Transverse
Average nTPM: 42.5
Samples: 479

Max nTPM: 87.3
Min nTPM: 26.2
Std nTPM: 8.7
Median nTPM: 40.9
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 87.3
GTEX-14JIY-3326-SM-6871E 60-69 years, male 84.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 83.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 71.4
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 66.7
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 66.6
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 65.9
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 64.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 64.6
GTEX-1LH75-2126-SM-EVR5F 50-59 years, female 64.5
GTEX-14C5O-2526-SM-5P9I5 60-69 years, male 64.2
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 32.1
FF:10014-101C5 62,83,84 years, mixed 32.1

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